RNA–Protein interactions for RNA: ENST00000335762.9

CACNA1C-202, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 6,968 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-202ENST00000335762 DCAF8L2P0C7V8 631 aa17.45■□□□□ 0.38
CACNA1C-202ENST00000335762 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.35
CACNA1C-202ENST00000335762 SUPT5HO00267 1087 aaKnown RBP16.68■□□□□ 0.26
CACNA1C-202ENST00000335762 ERICH6Q7L0X2 663 aa16.54■□□□□ 0.24
CACNA1C-202ENST00000335762 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
CACNA1C-202ENST00000335762 CCER1Q8TC90 406 aaPredicted RBP16.42■□□□□ 0.22
CACNA1C-202ENST00000335762 APLP2Q06481 763 aa16.33■□□□□ 0.2
CACNA1C-202ENST00000335762 CENPBP07199 599 aaPredicted RBP16.25■□□□□ 0.19
CACNA1C-202ENST00000335762 MYT1Q01538 1121 aa16.23■□□□□ 0.19
CACNA1C-202ENST00000335762 PCGF6Q9BYE7 350 aa16.01■□□□□ 0.15
CACNA1C-202ENST00000335762 NEFLP07196 543 aa15.97■□□□□ 0.15
CACNA1C-202ENST00000335762 SHROOM4Q9ULL8 1493 aa15.96■□□□□ 0.15
CACNA1C-202ENST00000335762 FAM9AQ8IZU1 332 aaPredicted RBP15.96■□□□□ 0.15
CACNA1C-202ENST00000335762 TTBK1Q5TCY1 1321 aaPredicted RBP15.95■□□□□ 0.14
CACNA1C-202ENST00000335762 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
CACNA1C-202ENST00000335762 YTHDC1Q96MU7 727 aaKnown RBP15.75■□□□□ 0.11
CACNA1C-202ENST00000335762 DAXXQ9UER7 740 aaPredicted RBP15.69■□□□□ 0.1
CACNA1C-202ENST00000335762 RANGAP1P46060 587 aaPredicted RBP15.62■□□□□ 0.09
CACNA1C-202ENST00000335762 ATP1B4Q9UN42 357 aaPredicted RBP15.57■□□□□ 0.08
CACNA1C-202ENST00000335762 TRIM41Q8WV44 630 aa15.37■□□□□ 0.05
CACNA1C-202ENST00000335762 RTL5Q5HYW3 569 aaPredicted RBP15.37■□□□□ 0.05
CACNA1C-202ENST00000335762 UBTFP17480 764 aaKnown RBP15.35■□□□□ 0.05
CACNA1C-202ENST00000335762 ZNF316A6NFI3 1004 aaPredicted RBP15.26■□□□□ 0.03
CACNA1C-202ENST00000335762 POLR3GLQ9BT43 218 aa15.25■□□□□ 0.03
CACNA1C-202ENST00000335762 CLSPNQ9HAW4 1339 aa15.19■□□□□ 0.02
CACNA1C-202ENST00000335762 HRCP23327 699 aa15.16■□□□□ 0.02
CACNA1C-202ENST00000335762 PPARGC1BQ86YN6 1023 aaKnown RBP15.14■□□□□ 0.01
CACNA1C-202ENST00000335762 CNGB1Q14028 1251 aaPredicted RBP15.11■□□□□ 0.01
CACNA1C-202ENST00000335762 TRIM26Q12899 539 aaPredicted RBP15.09■□□□□ 0.01
CACNA1C-202ENST00000335762 MYT1LQ9UL68 1186 aa15.04■□□□□ -0
CACNA1C-202ENST00000335762 ITGAEP38570 1179 aa15.03■□□□□ -0
CACNA1C-202ENST00000335762 NISCHQ9Y2I1 1504 aa14.96□□□□□ -0.01
CACNA1C-202ENST00000335762 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
CACNA1C-202ENST00000335762 CHIC1Q5VXU3 224 aa14.93□□□□□ -0.02
CACNA1C-202ENST00000335762 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
CACNA1C-202ENST00000335762 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
CACNA1C-202ENST00000335762 DIEXFQ68CQ4 756 aaKnown RBP14.84□□□□□ -0.03
CACNA1C-202ENST00000335762 ZBTB47Q9UFB7 747 aaPredicted RBP14.82□□□□□ -0.04
CACNA1C-202ENST00000335762 BCANQ96GW7 911 aa14.82□□□□□ -0.04
CACNA1C-202ENST00000335762 CDK11AQ9UQ88 783 aaPredicted RBP14.81□□□□□ -0.04
CACNA1C-202ENST00000335762 EIF5BO60841 1220 aaKnown RBP14.76□□□□□ -0.05
CACNA1C-202ENST00000335762 GTF3C3Q9Y5Q9 886 aa14.72□□□□□ -0.05
CACNA1C-202ENST00000335762 GLIPR1L2Q4G1C9 344 aa14.65□□□□□ -0.06
CACNA1C-202ENST00000335762 BCL11AQ9H165 835 aa14.63□□□□□ -0.07
CACNA1C-202ENST00000335762 ANP32AP39687 249 aaKnown RBP14.62□□□□□ -0.07
CACNA1C-202ENST00000335762 ANP32BQ92688 251 aaKnown RBP14.61□□□□□ -0.07
CACNA1C-202ENST00000335762 ANP32CO43423 234 aa14.6□□□□□ -0.07
CACNA1C-202ENST00000335762 LOC105371045A0A1W2PR82 267 aa14.6□□□□□ -0.07
CACNA1C-202ENST00000335762 CANXP27824 592 aaKnown RBP14.6□□□□□ -0.07
CACNA1C-202ENST00000335762 TRIM52Q96A61 297 aa14.55□□□□□ -0.08
CACNA1C-202ENST00000335762 NEUROD1Q13562 356 aa14.52□□□□□ -0.08
CACNA1C-202ENST00000335762 SLC24A1O60721 1099 aa14.52□□□□□ -0.08
CACNA1C-202ENST00000335762 NPM2Q86SE8 214 aaKnown RBP14.51□□□□□ -0.09
CACNA1C-202ENST00000335762 FAM50AQ14320 339 aaKnown RBP14.5□□□□□ -0.09
CACNA1C-202ENST00000335762 NEFMP07197 916 aa14.47□□□□□ -0.09
CACNA1C-202ENST00000335762 ZNF326Q5BKZ1 582 aaKnown RBP14.47□□□□□ -0.09
CACNA1C-202ENST00000335762 HSP90AA1P07900 732 aaKnown RBP14.45□□□□□ -0.1
CACNA1C-202ENST00000335762 ACIN1Q9UKV3 1341 aaKnown RBP14.38□□□□□ -0.11
CACNA1C-202ENST00000335762 UPF2Q9HAU5 1272 aaKnown RBP14.35□□□□□ -0.11
CACNA1C-202ENST00000335762 PLPPR3Q6T4P5 718 aa14.31□□□□□ -0.12
CACNA1C-202ENST00000335762 FKBP8Q14318 412 aa14.27□□□□□ -0.13
CACNA1C-202ENST00000335762 ARXQ96QS3 562 aa14.25□□□□□ -0.13
CACNA1C-202ENST00000335762 NBR1Q14596 966 aa14.24□□□□□ -0.13
CACNA1C-202ENST00000335762 CDK11BP21127 795 aaKnown RBP14.2□□□□□ -0.14
CACNA1C-202ENST00000335762 TNNT2P45379 298 aaPredicted RBP14.15□□□□□ -0.14
CACNA1C-202ENST00000335762 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.13□□□□□ -0.15
CACNA1C-202ENST00000335762 CCDC136Q96JN2 1154 aa14.13□□□□□ -0.15
CACNA1C-202ENST00000335762 HNRNPUQ00839 825 aaKnown RBP eCLIP14.13□□□□□ -0.15
CACNA1C-202ENST00000335762 TRIM44Q96DX7 344 aaPredicted RBP14.08□□□□□ -0.15
CACNA1C-202ENST00000335762 FAM9BQ8IZU0 186 aa14.06□□□□□ -0.16
CACNA1C-202ENST00000335762 SALL2Q9Y467 1007 aaPredicted RBP14.05□□□□□ -0.16
CACNA1C-202ENST00000335762 ANP32EQ9BTT0 268 aa14.02□□□□□ -0.16
CACNA1C-202ENST00000335762 NCLP19338 710 aaKnown RBP14.01□□□□□ -0.17
CACNA1C-202ENST00000335762 GOLGA6L22H0YM25 854 aa13.97□□□□□ -0.17
CACNA1C-202ENST00000335762 TMC1Q8TDI8 760 aa13.96□□□□□ -0.17
CACNA1C-202ENST00000335762 DDX10Q13206 875 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-202ENST00000335762 BECN1Q14457 450 aa13.96□□□□□ -0.18
CACNA1C-202ENST00000335762 PTMAP06454 111 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-202ENST00000335762 ERICH6BQ5W0A0 696 aa13.95□□□□□ -0.18
CACNA1C-202ENST00000335762 MYH16Q9H6N6 1097 aa13.94□□□□□ -0.18
CACNA1C-202ENST00000335762 DNTTIP2Q5QJE6 756 aaKnown RBP13.94□□□□□ -0.18
CACNA1C-202ENST00000335762 DDRGK1Q96HY6 314 aa13.93□□□□□ -0.18
CACNA1C-202ENST00000335762 FBLN2P98095 1184 aa13.93□□□□□ -0.18
CACNA1C-202ENST00000335762 TONSLQ96HA7 1378 aa13.92□□□□□ -0.18
CACNA1C-202ENST00000335762 ZNF777Q9ULD5 760 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-202ENST00000335762 CHGAP10645 457 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-202ENST00000335762 WDR43Q15061 677 aaKnown RBP eCLIP13.91□□□□□ -0.18
CACNA1C-202ENST00000335762 ZRSR1Q15695 479 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-202ENST00000335762 ESF1Q9H501 851 aaKnown RBP13.9□□□□□ -0.18
CACNA1C-202ENST00000335762 ARID3CA6NKF2 412 aa13.89□□□□□ -0.19
CACNA1C-202ENST00000335762 STAG3Q9UJ98 1225 aa13.89□□□□□ -0.19
CACNA1C-202ENST00000335762 A0A0G2JS52 829 aa13.88□□□□□ -0.19
CACNA1C-202ENST00000335762 NAP1L5Q96NT1 182 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-202ENST00000335762 MRS2Q9HD23 443 aa13.87□□□□□ -0.19
CACNA1C-202ENST00000335762 IRX6P78412 446 aaPredicted RBP13.86□□□□□ -0.19
CACNA1C-202ENST00000335762 P3H3Q8IVL6 736 aa13.85□□□□□ -0.19
CACNA1C-202ENST00000335762 PPM1GO15355 546 aaPredicted RBP13.82□□□□□ -0.2
CACNA1C-202ENST00000335762 RTN4Q9NQC3 1192 aaKnown RBP13.79□□□□□ -0.2
CACNA1C-202ENST00000335762 SENP3Q9H4L4 574 aaPredicted RBP13.76□□□□□ -0.21
CACNA1C-202ENST00000335762 PLCB2Q00722 1185 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms