Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 COIL-201ENST00000240316 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB4AP20338 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC11.12□□□□□ -0.63
RAB4AP20338 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC11.12□□□□□ -0.63
RAB4AP20338 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.12□□□□□ -0.63
RAB4AP20338 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
RAB4AP20338 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.12□□□□□ -0.63
RAB4AP20338 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB4AP20338 AC090505.1-201ENST00000430515 1834 ntBASIC11.12□□□□□ -0.63
RAB4AP20338 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
RAB4AP20338 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB4AP20338 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
RAB4AP20338 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.12□□□□□ -0.63
RAB4AP20338 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
RAB4AP20338 HLA-H-201ENST00000383620 1096 ntBASIC11.12□□□□□ -0.63
RAB4AP20338 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB4AP20338 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.12□□□□□ -0.63
RAB4AP20338 AC098831.1-202ENST00000438821 336 ntBASIC11.12□□□□□ -0.63
RAB4AP20338 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.12□□□□□ -0.63
RAB4AP20338 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB4AP20338 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.12□□□□□ -0.63
RAB4AP20338 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
RAB4AP20338 KRT19P2-202ENST00000557173 1012 ntBASIC11.12□□□□□ -0.63
RAB4AP20338 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB4AP20338 AC068137.2-201ENST00000605408 478 ntBASIC11.12□□□□□ -0.63
RAB4AP20338 AC148477.8-201ENST00000624298 468 ntBASIC11.12□□□□□ -0.63
RAB4AP20338 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB4AP20338 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB4AP20338 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
RAB4AP20338 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
RAB4AP20338 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
RAB4AP20338 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC11.12□□□□□ -0.63
RAB4AP20338 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB4AP20338 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4AP20338 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4AP20338 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB4AP20338 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4AP20338 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
RAB4AP20338 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4AP20338 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4AP20338 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RAB4AP20338 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB4AP20338 AC104457.1-201ENST00000401024 814 ntBASIC11.11□□□□□ -0.63
RAB4AP20338 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.11□□□□□ -0.63
RAB4AP20338 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB4AP20338 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.11□□□□□ -0.63
RAB4AP20338 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.11□□□□□ -0.63
RAB4AP20338 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC11.11□□□□□ -0.63
RAB4AP20338 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms