Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC13.17□□□□□ -0.3
COX6A1P12074 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 TUBB8P4-201ENST00000511806 1324 ntBASIC13.17□□□□□ -0.3
COX6A1P12074 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
COX6A1P12074 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.17□□□□□ -0.3
COX6A1P12074 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.17□□□□□ -0.3
COX6A1P12074 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.17□□□□□ -0.3
COX6A1P12074 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.17□□□□□ -0.3
COX6A1P12074 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 OR5BD1P-201ENST00000532527 817 ntBASIC13.17□□□□□ -0.3
COX6A1P12074 AP000911.2-201ENST00000534330 502 ntBASIC13.17□□□□□ -0.3
COX6A1P12074 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.17□□□□□ -0.3
COX6A1P12074 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.17□□□□□ -0.3
COX6A1P12074 KLF17P1-201ENST00000547105 1126 ntBASIC13.17□□□□□ -0.3
COX6A1P12074 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.17□□□□□ -0.3
COX6A1P12074 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.17□□□□□ -0.3
COX6A1P12074 MIR6727-201ENST00000620702 65 ntBASIC13.17□□□□□ -0.3
COX6A1P12074 AC073911.3-201ENST00000624401 631 ntBASIC13.17□□□□□ -0.3
COX6A1P12074 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.17□□□□□ -0.3
COX6A1P12074 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.17□□□□□ -0.3
COX6A1P12074 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
COX6A1P12074 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.17□□□□□ -0.3
COX6A1P12074 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
COX6A1P12074 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.17□□□□□ -0.3
COX6A1P12074 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
COX6A1P12074 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
COX6A1P12074 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.17□□□□□ -0.3
COX6A1P12074 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
COX6A1P12074 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.16□□□□□ -0.3
COX6A1P12074 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.16□□□□□ -0.3
COX6A1P12074 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.16□□□□□ -0.3
COX6A1P12074 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.16□□□□□ -0.3
COX6A1P12074 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.16□□□□□ -0.3
COX6A1P12074 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
COX6A1P12074 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.16□□□□□ -0.3
COX6A1P12074 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.16□□□□□ -0.3
COX6A1P12074 RN7SKP109-201ENST00000410592 316 ntBASIC13.16□□□□□ -0.3
COX6A1P12074 LINC00265-2P-201ENST00000413372 782 ntBASIC13.16□□□□□ -0.3
COX6A1P12074 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.16□□□□□ -0.3
COX6A1P12074 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.16□□□□□ -0.3
COX6A1P12074 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.16□□□□□ -0.3
COX6A1P12074 AL354861.1-201ENST00000445213 355 ntBASIC13.16□□□□□ -0.3
COX6A1P12074 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.16□□□□□ -0.3
COX6A1P12074 SCARNA12-201ENST00000459155 270 ntBASIC13.16□□□□□ -0.3
COX6A1P12074 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 GOLGA2P8-201ENST00000505201 779 ntBASIC13.16□□□□□ -0.3
COX6A1P12074 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.16□□□□□ -0.3
COX6A1P12074 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.16□□□□□ -0.3
COX6A1P12074 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.16□□□□□ -0.3
COX6A1P12074 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
COX6A1P12074 RN7SL455P-201ENST00000580629 282 ntBASIC13.16□□□□□ -0.3
COX6A1P12074 RN7SL470P-201ENST00000583069 259 ntBASIC13.16□□□□□ -0.3
COX6A1P12074 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.16□□□□□ -0.3
COX6A1P12074 AP000322.3-201ENST00000608665 388 ntBASIC13.16□□□□□ -0.3
COX6A1P12074 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.16□□□□□ -0.3
COX6A1P12074 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
COX6A1P12074 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COX6A1P12074 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms