Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.21■□□□□ 0.35
CHGBP05060 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.21■□□□□ 0.35
CHGBP05060 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.21■□□□□ 0.35
CHGBP05060 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CHGBP05060 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHGBP05060 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC17.21■□□□□ 0.35
CHGBP05060 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
CHGBP05060 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CHGBP05060 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.21■□□□□ 0.34
CHGBP05060 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHGBP05060 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHGBP05060 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CHGBP05060 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHGBP05060 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHGBP05060 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.2■□□□□ 0.34
CHGBP05060 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CHGBP05060 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.2■□□□□ 0.34
CHGBP05060 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CHGBP05060 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.2■□□□□ 0.34
CHGBP05060 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.2■□□□□ 0.34
CHGBP05060 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.2■□□□□ 0.34
CHGBP05060 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHGBP05060 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.2■□□□□ 0.34
CHGBP05060 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.2■□□□□ 0.34
CHGBP05060 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.2■□□□□ 0.34
CHGBP05060 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHGBP05060 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.2■□□□□ 0.34
CHGBP05060 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.2■□□□□ 0.34
CHGBP05060 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHGBP05060 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHGBP05060 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.19■□□□□ 0.34
CHGBP05060 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHGBP05060 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.19■□□□□ 0.34
CHGBP05060 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.19■□□□□ 0.34
CHGBP05060 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.19■□□□□ 0.34
CHGBP05060 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.19■□□□□ 0.34
CHGBP05060 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.19■□□□□ 0.34
CHGBP05060 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.19■□□□□ 0.34
CHGBP05060 AC095040.1-201ENST00000513286 675 ntBASIC17.19■□□□□ 0.34
CHGBP05060 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.19■□□□□ 0.34
CHGBP05060 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.19■□□□□ 0.34
CHGBP05060 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.19■□□□□ 0.34
CHGBP05060 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.19■□□□□ 0.34
CHGBP05060 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.19■□□□□ 0.34
CHGBP05060 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.19■□□□□ 0.34
CHGBP05060 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
CHGBP05060 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.19■□□□□ 0.34
CHGBP05060 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CHGBP05060 TBC1D3J-201ENST00000620719 1426 ntBASIC17.19■□□□□ 0.34
CHGBP05060 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.19■□□□□ 0.34
CHGBP05060 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHGBP05060 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms