Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
POLR1AO95602 HLF-202ENST00000430986 1385 ntTSL 2 BASIC20.32■□□□□ 0.84
POLR1AO95602 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1AO95602 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1AO95602 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC20.32■□□□□ 0.84
POLR1AO95602 FAM21EP-201ENST00000417804 985 ntBASIC20.32■□□□□ 0.84
POLR1AO95602 KRT18P62-201ENST00000446618 1287 ntBASIC20.32■□□□□ 0.84
POLR1AO95602 RN7SL351P-201ENST00000469306 248 ntBASIC20.32■□□□□ 0.84
POLR1AO95602 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC20.32■□□□□ 0.84
POLR1AO95602 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1AO95602 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC20.32■□□□□ 0.84
POLR1AO95602 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC20.32■□□□□ 0.84
POLR1AO95602 AL050341.2-201ENST00000567508 1541 ntBASIC20.32■□□□□ 0.84
POLR1AO95602 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
POLR1AO95602 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
POLR1AO95602 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
POLR1AO95602 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
POLR1AO95602 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
POLR1AO95602 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC20.32■□□□□ 0.84
POLR1AO95602 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1AO95602 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC20.32■□□□□ 0.84
POLR1AO95602 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC20.31■□□□□ 0.84
POLR1AO95602 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
POLR1AO95602 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1AO95602 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1AO95602 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1AO95602 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC20.31■□□□□ 0.84
POLR1AO95602 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1AO95602 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
POLR1AO95602 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1AO95602 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1AO95602 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC20.31■□□□□ 0.84
POLR1AO95602 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1AO95602 HNRNPA3P6-201ENST00000472163 1006 ntBASIC20.31■□□□□ 0.84
POLR1AO95602 PRSS3P1-201ENST00000503996 742 ntBASIC20.31■□□□□ 0.84
POLR1AO95602 EEF1GP8-201ENST00000506566 1154 ntBASIC20.31■□□□□ 0.84
POLR1AO95602 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1AO95602 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC20.31■□□□□ 0.84
POLR1AO95602 BMF-206ENST00000558774 671 ntTSL 3 BASIC20.31■□□□□ 0.84
POLR1AO95602 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC20.31■□□□□ 0.84
POLR1AO95602 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
POLR1AO95602 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1AO95602 HSPA8P5-201ENST00000456928 2069 ntBASIC20.31■□□□□ 0.84
POLR1AO95602 KRT8P18-201ENST00000413425 1445 ntBASIC20.31■□□□□ 0.84
POLR1AO95602 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC20.31■□□□□ 0.84
POLR1AO95602 AC090643.2-201ENST00000623442 2029 ntBASIC20.31■□□□□ 0.84
POLR1AO95602 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1AO95602 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC20.31■□□□□ 0.84
POLR1AO95602 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1AO95602 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1AO95602 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1AO95602 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1AO95602 PDXDC2P-206ENST00000534700 1315 ntBASIC20.31■□□□□ 0.84
POLR1AO95602 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC20.31■□□□□ 0.84
POLR1AO95602 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1AO95602 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
POLR1AO95602 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1AO95602 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1AO95602 MED15P3-201ENST00000413613 326 ntBASIC20.3■□□□□ 0.84
POLR1AO95602 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1AO95602 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC20.3■□□□□ 0.84
POLR1AO95602 AL512324.3-201ENST00000619383 882 ntBASIC20.3■□□□□ 0.84
POLR1AO95602 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1AO95602 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
POLR1AO95602 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1AO95602 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC20.3■□□□□ 0.84
POLR1AO95602 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1AO95602 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC20.3■□□□□ 0.84
POLR1AO95602 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
POLR1AO95602 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
POLR1AO95602 AC027601.5-201ENST00000624065 2482 ntBASIC20.3■□□□□ 0.84
POLR1AO95602 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC20.3■□□□□ 0.84
POLR1AO95602 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1AO95602 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1AO95602 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
POLR1AO95602 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1AO95602 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
POLR1AO95602 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC20.3■□□□□ 0.84
POLR1AO95602 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC20.3■□□□□ 0.84
POLR1AO95602 U73169.1-201ENST00000395152 367 ntBASIC20.3■□□□□ 0.84
POLR1AO95602 BX679664.3-201ENST00000414070 555 ntBASIC20.3■□□□□ 0.84
POLR1AO95602 AC113935.1-201ENST00000471722 555 ntBASIC20.3■□□□□ 0.84
POLR1AO95602 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC20.3■□□□□ 0.84
POLR1AO95602 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC20.3■□□□□ 0.84
POLR1AO95602 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC20.3■□□□□ 0.84
POLR1AO95602 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
POLR1AO95602 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC20.29■□□□□ 0.84
POLR1AO95602 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1AO95602 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1AO95602 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
POLR1AO95602 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1AO95602 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC20.29■□□□□ 0.84
POLR1AO95602 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1AO95602 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1AO95602 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
POLR1AO95602 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
POLR1AO95602 KRT8P43-201ENST00000406052 1458 ntBASIC20.29■□□□□ 0.84
POLR1AO95602 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC20.29■□□□□ 0.84
POLR1AO95602 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC20.29■□□□□ 0.84
POLR1AO95602 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms