Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 RN7SKP109-201ENST00000410592 316 ntBASIC16.12■□□□□ 0.17
COL20A1Q9P218 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 AL354861.1-201ENST00000445213 355 ntBASIC16.12■□□□□ 0.17
COL20A1Q9P218 SCARNA12-201ENST00000459155 270 ntBASIC16.12■□□□□ 0.17
COL20A1Q9P218 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 OR5BD1P-201ENST00000532527 817 ntBASIC16.12■□□□□ 0.17
COL20A1Q9P218 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 AC007250.1-201ENST00000608934 338 ntBASIC16.12■□□□□ 0.17
COL20A1Q9P218 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL20A1Q9P218 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
COL20A1Q9P218 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 AC103702.1-201ENST00000548801 2630 ntBASIC16.11■□□□□ 0.17
COL20A1Q9P218 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 RN7SL788P-201ENST00000460504 316 ntBASIC16.11■□□□□ 0.17
COL20A1Q9P218 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 AC068867.1-201ENST00000559855 150 ntBASIC16.11■□□□□ 0.17
COL20A1Q9P218 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 MIR4750-201ENST00000584564 56 ntBASIC16.11■□□□□ 0.17
COL20A1Q9P218 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 AP001065.2-201ENST00000617205 644 ntBASIC16.11■□□□□ 0.17
COL20A1Q9P218 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
COL20A1Q9P218 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL20A1Q9P218 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL20A1Q9P218 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.1■□□□□ 0.17
COL20A1Q9P218 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms