Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 FO393412.1-201ENST00000619841 382 ntBASIC16.9■□□□□ 0.3
TRIM47Q96LD4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 AC027601.3-201ENST00000622907 509 ntBASIC16.9■□□□□ 0.3
TRIM47Q96LD4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 LILRP1-201ENST00000444199 1370 ntBASIC16.89■□□□□ 0.3
TRIM47Q96LD4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM47Q96LD4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM47Q96LD4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 AL139008.1-201ENST00000437894 228 ntBASIC16.89■□□□□ 0.29
TRIM47Q96LD4 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 RPSAP15-201ENST00000448168 861 ntBASIC16.89■□□□□ 0.29
TRIM47Q96LD4 DUTP3-201ENST00000450025 415 ntBASIC16.89■□□□□ 0.29
TRIM47Q96LD4 MRPL22P1-201ENST00000505398 616 ntBASIC16.89■□□□□ 0.29
TRIM47Q96LD4 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 AC026410.1-201ENST00000507366 1101 ntBASIC16.89■□□□□ 0.29
TRIM47Q96LD4 ALG1L13P-202ENST00000519320 584 ntBASIC16.89■□□□□ 0.29
TRIM47Q96LD4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 AC067750.1-201ENST00000608826 6545 ntBASIC16.89■□□□□ 0.29
TRIM47Q96LD4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM47Q96LD4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 MIR5196-201ENST00000578146 115 ntBASIC16.88■□□□□ 0.29
TRIM47Q96LD4 AC007326.1-201ENST00000604539 458 ntBASIC16.88■□□□□ 0.29
TRIM47Q96LD4 AC009560.1-201ENST00000620208 434 ntBASIC16.88■□□□□ 0.29
TRIM47Q96LD4 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM47Q96LD4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms