Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 AC097376.2-205ENST00000610159 5334 ntBASIC15.33■□□□□ 0.04
SHC3Q92529 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.33■□□□□ 0.04
SHC3Q92529 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
SHC3Q92529 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.33■□□□□ 0.04
SHC3Q92529 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 GK-202ENST00000378941 458 ntTSL 3 BASIC15.33■□□□□ 0.04
SHC3Q92529 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 AC104073.2-201ENST00000453737 312 ntBASIC15.33■□□□□ 0.04
SHC3Q92529 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.33■□□□□ 0.04
SHC3Q92529 FAM8A2P-201ENST00000528813 1142 ntBASIC15.33■□□□□ 0.04
SHC3Q92529 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.33■□□□□ 0.04
SHC3Q92529 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.33■□□□□ 0.04
SHC3Q92529 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.33■□□□□ 0.04
SHC3Q92529 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.33■□□□□ 0.04
SHC3Q92529 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.33■□□□□ 0.04
SHC3Q92529 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.33■□□□□ 0.04
SHC3Q92529 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.33■□□□□ 0.04
SHC3Q92529 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
SHC3Q92529 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SHC3Q92529 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.33■□□□□ 0.04
SHC3Q92529 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.33■□□□□ 0.04
SHC3Q92529 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.33■□□□□ 0.04
SHC3Q92529 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
SHC3Q92529 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.33■□□□□ 0.04
SHC3Q92529 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHC3Q92529 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.33■□□□□ 0.04
SHC3Q92529 AC104581.4-201ENST00000623126 3052 ntBASIC15.32■□□□□ 0.04
SHC3Q92529 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.32■□□□□ 0.04
SHC3Q92529 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SHC3Q92529 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SHC3Q92529 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SHC3Q92529 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SHC3Q92529 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SHC3Q92529 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.32■□□□□ 0.04
SHC3Q92529 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SHC3Q92529 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SHC3Q92529 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.32■□□□□ 0.04
SHC3Q92529 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SHC3Q92529 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SHC3Q92529 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 AK2P2-201ENST00000439142 405 ntBASIC15.32■□□□□ 0.04
SHC3Q92529 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.32■□□□□ 0.04
SHC3Q92529 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.32■□□□□ 0.04
SHC3Q92529 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.32■□□□□ 0.04
SHC3Q92529 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
SHC3Q92529 AL132994.2-201ENST00000603120 687 ntBASIC15.32■□□□□ 0.04
SHC3Q92529 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.32■□□□□ 0.04
SHC3Q92529 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SHC3Q92529 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SHC3Q92529 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.32■□□□□ 0.04
SHC3Q92529 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SHC3Q92529 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.32■□□□□ 0.04
SHC3Q92529 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 AC015909.5-201ENST00000624336 2266 ntBASIC15.32■□□□□ 0.04
SHC3Q92529 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SHC3Q92529 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHC3Q92529 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.32■□□□□ 0.04
SHC3Q92529 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.31■□□□□ 0.04
SHC3Q92529 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC3Q92529 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.31■□□□□ 0.04
SHC3Q92529 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
SHC3Q92529 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms