Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 HERC2P10-201ENST00000570209 2393 ntBASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM53Q6P2H8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 REXO1L4P-201ENST00000605109 1937 ntBASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 RN7SL752P-201ENST00000463779 287 ntBASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 KRT18P25-201ENST00000508931 1278 ntBASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 AP001063.1-201ENST00000568332 529 ntBASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 AC009486.1-201ENST00000569860 813 ntBASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM53Q6P2H8 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 AL158070.2-201ENST00000623713 1621 ntBASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM53Q6P2H8 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms