Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.49□□□□□ -0.25
EFNA3P52797 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
EFNA3P52797 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
EFNA3P52797 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.49□□□□□ -0.25
EFNA3P52797 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
EFNA3P52797 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.49□□□□□ -0.25
EFNA3P52797 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
EFNA3P52797 AC099063.4-201ENST00000641099 1602 ntBASIC13.49□□□□□ -0.25
EFNA3P52797 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
EFNA3P52797 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
EFNA3P52797 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.49□□□□□ -0.25
EFNA3P52797 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
EFNA3P52797 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.48□□□□□ -0.25
EFNA3P52797 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
EFNA3P52797 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 CAP2P1-201ENST00000557743 1390 ntBASIC13.48□□□□□ -0.25
EFNA3P52797 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.48□□□□□ -0.25
EFNA3P52797 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
EFNA3P52797 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
EFNA3P52797 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
EFNA3P52797 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.48□□□□□ -0.25
EFNA3P52797 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.48□□□□□ -0.25
EFNA3P52797 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.48□□□□□ -0.25
EFNA3P52797 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.48□□□□□ -0.25
EFNA3P52797 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.48□□□□□ -0.25
EFNA3P52797 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
EFNA3P52797 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.48□□□□□ -0.25
EFNA3P52797 AC093752.3-201ENST00000567343 901 ntBASIC13.48□□□□□ -0.25
EFNA3P52797 MIR3677-201ENST00000578964 60 ntBASIC13.48□□□□□ -0.25
EFNA3P52797 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.48□□□□□ -0.25
EFNA3P52797 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.48□□□□□ -0.25
EFNA3P52797 AC006453.1-201ENST00000636037 1257 ntBASIC13.48□□□□□ -0.25
EFNA3P52797 AC023908.3-201ENST00000564211 3047 ntBASIC13.48□□□□□ -0.25
EFNA3P52797 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
EFNA3P52797 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
EFNA3P52797 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.48□□□□□ -0.25
EFNA3P52797 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
EFNA3P52797 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
EFNA3P52797 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
EFNA3P52797 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
EFNA3P52797 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.48□□□□□ -0.25
EFNA3P52797 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA3P52797 HSPA8P5-201ENST00000456928 2069 ntBASIC13.48□□□□□ -0.25
EFNA3P52797 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
EFNA3P52797 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
EFNA3P52797 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
EFNA3P52797 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.47□□□□□ -0.25
EFNA3P52797 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNA3P52797 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
EFNA3P52797 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
EFNA3P52797 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.47□□□□□ -0.25
EFNA3P52797 ELK2AP-201ENST00000392510 1007 ntBASIC13.47□□□□□ -0.25
EFNA3P52797 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.47□□□□□ -0.25
EFNA3P52797 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA3P52797 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms