Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCNKBP51801 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCNKBP51801 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCNKBP51801 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCNKBP51801 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.31■□□□□ 0.04
CLCNKBP51801 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.31■□□□□ 0.04
CLCNKBP51801 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CLCNKBP51801 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCNKBP51801 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCNKBP51801 MIR7845-201ENST00000618396 99 ntBASIC15.31■□□□□ 0.04
CLCNKBP51801 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCNKBP51801 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCNKBP51801 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCNKBP51801 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCNKBP51801 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCNKBP51801 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCNKBP51801 AC092978.1-202ENST00000637590 1327 ntBASIC15.31■□□□□ 0.04
CLCNKBP51801 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCNKBP51801 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CLCNKBP51801 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCNKBP51801 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCNKBP51801 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CLCNKBP51801 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCNKBP51801 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCNKBP51801 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCNKBP51801 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCNKBP51801 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCNKBP51801 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCNKBP51801 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCNKBP51801 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCNKBP51801 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLCNKBP51801 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLCNKBP51801 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCNKBP51801 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCNKBP51801 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLCNKBP51801 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCNKBP51801 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCNKBP51801 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 RPSAP31-201ENST00000416648 895 ntBASIC15.3■□□□□ 0.04
CLCNKBP51801 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCNKBP51801 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLCNKBP51801 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCNKBP51801 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCNKBP51801 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCNKBP51801 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCNKBP51801 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLCNKBP51801 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCNKBP51801 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CLCNKBP51801 AL021707.6-201ENST00000609212 491 ntBASIC15.3■□□□□ 0.04
CLCNKBP51801 AC087392.5-201ENST00000612517 489 ntBASIC15.3■□□□□ 0.04
CLCNKBP51801 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CLCNKBP51801 AP001184.1-201ENST00000637936 376 ntBASIC15.3■□□□□ 0.04
CLCNKBP51801 MYO15B-237ENST00000642007 4893 ntBASIC15.3■□□□□ 0.04
CLCNKBP51801 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLCNKBP51801 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCNKBP51801 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCNKBP51801 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
CLCNKBP51801 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCNKBP51801 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCNKBP51801 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCNKBP51801 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCNKBP51801 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCNKBP51801 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCNKBP51801 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCNKBP51801 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCNKBP51801 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCNKBP51801 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCNKBP51801 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCNKBP51801 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCNKBP51801 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CLCNKBP51801 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCNKBP51801 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCNKBP51801 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCNKBP51801 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCNKBP51801 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCNKBP51801 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLCNKBP51801 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCNKBP51801 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCNKBP51801 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCNKBP51801 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.29■□□□□ 0.04
CLCNKBP51801 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCNKBP51801 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms