Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.89■□□□□ 0.13
GPC3P51654 AC021016.3-201ENST00000608367 477 ntBASIC15.89■□□□□ 0.13
GPC3P51654 AC103691.2-201ENST00000618824 433 ntBASIC15.89■□□□□ 0.13
GPC3P51654 AC090386.2-201ENST00000623010 1039 ntBASIC15.89■□□□□ 0.13
GPC3P51654 AC051619.9-201ENST00000623237 597 ntBASIC15.89■□□□□ 0.13
GPC3P51654 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.89■□□□□ 0.13
GPC3P51654 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.89■□□□□ 0.13
GPC3P51654 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
GPC3P51654 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC3P51654 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GPC3P51654 RN7SL832P-201ENST00000607781 1756 ntBASIC15.89■□□□□ 0.13
GPC3P51654 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC3P51654 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.89■□□□□ 0.13
GPC3P51654 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC3P51654 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
GPC3P51654 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.89■□□□□ 0.13
GPC3P51654 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.89■□□□□ 0.13
GPC3P51654 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC3P51654 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GPC3P51654 KRT18P9-201ENST00000604826 1300 ntBASIC15.89■□□□□ 0.13
GPC3P51654 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.89■□□□□ 0.13
GPC3P51654 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
GPC3P51654 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.89■□□□□ 0.13
GPC3P51654 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
GPC3P51654 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.88■□□□□ 0.13
GPC3P51654 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
GPC3P51654 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC3P51654 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC3P51654 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
GPC3P51654 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
GPC3P51654 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
GPC3P51654 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
GPC3P51654 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC3P51654 FXNP2-201ENST00000411625 547 ntBASIC15.88■□□□□ 0.13
GPC3P51654 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.88■□□□□ 0.13
GPC3P51654 AL161932.2-201ENST00000435436 679 ntBASIC15.88■□□□□ 0.13
GPC3P51654 AP000358.1-201ENST00000456260 156 ntBASIC15.88■□□□□ 0.13
GPC3P51654 RPS2P36-201ENST00000456516 831 ntBASIC15.88■□□□□ 0.13
GPC3P51654 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.88■□□□□ 0.13
GPC3P51654 RN7SL277P-201ENST00000481521 288 ntBASIC15.88■□□□□ 0.13
GPC3P51654 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
GPC3P51654 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
GPC3P51654 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC3P51654 AC093752.3-201ENST00000567343 901 ntBASIC15.88■□□□□ 0.13
GPC3P51654 MIR4722-201ENST00000578292 60 ntBASIC15.88■□□□□ 0.13
GPC3P51654 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC3P51654 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.88■□□□□ 0.13
GPC3P51654 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.88■□□□□ 0.13
GPC3P51654 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC3P51654 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
GPC3P51654 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.88■□□□□ 0.13
GPC3P51654 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC3P51654 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
GPC3P51654 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GPC3P51654 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.88■□□□□ 0.13
GPC3P51654 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.88■□□□□ 0.13
GPC3P51654 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
GPC3P51654 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.88■□□□□ 0.13
GPC3P51654 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.88■□□□□ 0.13
GPC3P51654 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.87■□□□□ 0.13
GPC3P51654 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC3P51654 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC3P51654 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC3P51654 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.87■□□□□ 0.13
GPC3P51654 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC3P51654 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.87■□□□□ 0.13
GPC3P51654 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC3P51654 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GPC3P51654 KRT8P31-201ENST00000504812 1408 ntBASIC15.87■□□□□ 0.13
GPC3P51654 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC3P51654 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC3P51654 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC3P51654 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC3P51654 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
GPC3P51654 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC3P51654 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC3P51654 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GPC3P51654 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.87■□□□□ 0.13
GPC3P51654 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms