Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.81■□□□□ 0.12
CPT1AP50416 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.81■□□□□ 0.12
CPT1AP50416 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 AQP7P5-201ENST00000428759 1049 ntBASIC15.81■□□□□ 0.12
CPT1AP50416 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.81■□□□□ 0.12
CPT1AP50416 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.81■□□□□ 0.12
CPT1AP50416 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.81■□□□□ 0.12
CPT1AP50416 AQP7P4-201ENST00000447083 1042 ntBASIC15.81■□□□□ 0.12
CPT1AP50416 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CPT1AP50416 AQP7P2-201ENST00000453967 1041 ntBASIC15.81■□□□□ 0.12
CPT1AP50416 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.81■□□□□ 0.12
CPT1AP50416 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 VENTXP3-201ENST00000546480 773 ntBASIC15.81■□□□□ 0.12
CPT1AP50416 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.81■□□□□ 0.12
CPT1AP50416 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.81■□□□□ 0.12
CPT1AP50416 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.81■□□□□ 0.12
CPT1AP50416 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 AC010976.2-201ENST00000609697 852 ntBASIC15.81■□□□□ 0.12
CPT1AP50416 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.81■□□□□ 0.12
CPT1AP50416 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.81■□□□□ 0.12
CPT1AP50416 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 MIR6746-201ENST00000620971 63 ntBASIC15.81■□□□□ 0.12
CPT1AP50416 AQP7P3-201ENST00000624547 1041 ntBASIC15.81■□□□□ 0.12
CPT1AP50416 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.81■□□□□ 0.12
CPT1AP50416 MTHFR-210ENST00000641407 2387 ntBASIC15.81■□□□□ 0.12
CPT1AP50416 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CPT1AP50416 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CPT1AP50416 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CPT1AP50416 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.81■□□□□ 0.12
CPT1AP50416 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CPT1AP50416 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.8■□□□□ 0.12
CPT1AP50416 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.8■□□□□ 0.12
CPT1AP50416 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.8■□□□□ 0.12
CPT1AP50416 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CPT1AP50416 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CPT1AP50416 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CPT1AP50416 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CPT1AP50416 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 SHMT1P1-201ENST00000419974 1312 ntBASIC15.8■□□□□ 0.12
CPT1AP50416 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CPT1AP50416 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.8■□□□□ 0.12
CPT1AP50416 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.8■□□□□ 0.12
CPT1AP50416 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC15.8■□□□□ 0.12
CPT1AP50416 TPT1P11-201ENST00000458482 498 ntBASIC15.8■□□□□ 0.12
CPT1AP50416 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC15.8■□□□□ 0.12
CPT1AP50416 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.8■□□□□ 0.12
CPT1AP50416 AC008026.2-201ENST00000495438 348 ntBASIC15.8■□□□□ 0.12
CPT1AP50416 GOLGA2P8-201ENST00000505201 779 ntBASIC15.8■□□□□ 0.12
CPT1AP50416 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC15.8■□□□□ 0.12
CPT1AP50416 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.8■□□□□ 0.12
CPT1AP50416 AC244250.3-201ENST00000620749 366 ntBASIC15.8■□□□□ 0.12
CPT1AP50416 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.8■□□□□ 0.12
CPT1AP50416 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.8■□□□□ 0.12
CPT1AP50416 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CPT1AP50416 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.8■□□□□ 0.12
CPT1AP50416 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CPT1AP50416 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.8■□□□□ 0.12
CPT1AP50416 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CPT1AP50416 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
CPT1AP50416 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
CPT1AP50416 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CPT1AP50416 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPT1AP50416 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPT1AP50416 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.79■□□□□ 0.12
CPT1AP50416 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CPT1AP50416 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPT1AP50416 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CPT1AP50416 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPT1AP50416 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPT1AP50416 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPT1AP50416 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPT1AP50416 AC092384.3-202ENST00000564646 2873 ntBASIC15.79■□□□□ 0.12
CPT1AP50416 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPT1AP50416 AC232323.1-201ENST00000540724 2099 ntBASIC15.79■□□□□ 0.12
CPT1AP50416 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms