Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 BSG-214ENST00000614867 960 ntTSL 3 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 DLG1-201ENST00000346964 5034 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 PHC1-201ENST00000433083 5033 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 NFRKB-201ENST00000446488 5093 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 LINC02133-202ENST00000569726 2626 ntTSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 AC068896.1-201ENST00000494792 3422 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 PRDM1-201ENST00000369089 4675 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
CHKB-CPT1BH3BT56 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AC011899.1-201ENST00000436489 3600 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 NWD1-201ENST00000379808 7254 ntTSL 5 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 ARL3-201ENST00000260746 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 NSD3-203ENST00000433384 5276 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 Z97192.1-201ENST00000391625 3894 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 MUM1-214ENST00000591806 4067 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AC022517.1-201ENST00000592429 346 ntBASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AC124864.1-201ENST00000623408 392 ntBASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 AC097493.4-201ENST00000641197 219 ntBASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 PKP2-201ENST00000070846 4241 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 SIGLEC16-201ENST00000599858 1437 ntBASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 ACSL6-202ENST00000357096 6298 ntTSL 5 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 PCDHA10-203ENST00000562220 12358 ntBASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CHKB-CPT1BH3BT56 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms