RNA–Protein interactions for RNA: ENST00000562220.2

PCDHA10-203, Transcript of protocadherin alpha 10, humanhuman

BASIC

Gene PCDHA10, Length 12,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA10-203ENST00000562220 DCAF8L2P0C7V8 631 aa16.54■□□□□ 0.24
PCDHA10-203ENST00000562220 PELP1Q8IZL8 1130 aaKnown RBP16.23■□□□□ 0.19
PCDHA10-203ENST00000562220 SUPT5HO00267 1087 aaKnown RBP15.8■□□□□ 0.12
PCDHA10-203ENST00000562220 APLP2Q06481 763 aa15.55■□□□□ 0.08
PCDHA10-203ENST00000562220 NISCHQ9Y2I1 1504 aa15.49■□□□□ 0.07
PCDHA10-203ENST00000562220 CCER1Q8TC90 406 aaPredicted RBP15.42■□□□□ 0.06
PCDHA10-203ENST00000562220 SHROOM4Q9ULL8 1493 aa15.41■□□□□ 0.06
PCDHA10-203ENST00000562220 ERICH6Q7L0X2 663 aa15.39■□□□□ 0.05
PCDHA10-203ENST00000562220 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
PCDHA10-203ENST00000562220 FAM9AQ8IZU1 332 aaPredicted RBP15.35■□□□□ 0.05
PCDHA10-203ENST00000562220 CENPBP07199 599 aaPredicted RBP15.33■□□□□ 0.04
PCDHA10-203ENST00000562220 MYT1Q01538 1121 aa15.3■□□□□ 0.04
PCDHA10-203ENST00000562220 ZEB1P37275 1124 aaPredicted RBP15.22■□□□□ 0.03
PCDHA10-203ENST00000562220 PCGF6Q9BYE7 350 aa15.09■□□□□ 0.01
PCDHA10-203ENST00000562220 NEFLP07196 543 aa15.08■□□□□ 0
PCDHA10-203ENST00000562220 TTBK1Q5TCY1 1321 aaPredicted RBP14.95□□□□□ -0.02
PCDHA10-203ENST00000562220 DAXXQ9UER7 740 aaPredicted RBP14.76□□□□□ -0.05
PCDHA10-203ENST00000562220 YTHDC1Q96MU7 727 aaKnown RBP14.74□□□□□ -0.05
PCDHA10-203ENST00000562220 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
PCDHA10-203ENST00000562220 RANGAP1P46060 587 aaPredicted RBP14.72□□□□□ -0.05
PCDHA10-203ENST00000562220 ATP1B4Q9UN42 357 aaPredicted RBP14.7□□□□□ -0.06
PCDHA10-203ENST00000562220 UBTFP17480 764 aaKnown RBP14.69□□□□□ -0.06
PCDHA10-203ENST00000562220 RTL5Q5HYW3 569 aaPredicted RBP14.44□□□□□ -0.1
PCDHA10-203ENST00000562220 TRIM26Q12899 539 aaPredicted RBP14.44□□□□□ -0.1
PCDHA10-203ENST00000562220 ZNF316A6NFI3 1004 aaPredicted RBP14.39□□□□□ -0.11
PCDHA10-203ENST00000562220 HRCP23327 699 aa14.32□□□□□ -0.12
PCDHA10-203ENST00000562220 POLR3GLQ9BT43 218 aa14.31□□□□□ -0.12
PCDHA10-203ENST00000562220 MYT1LQ9UL68 1186 aa14.23□□□□□ -0.13
PCDHA10-203ENST00000562220 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
PCDHA10-203ENST00000562220 PPARGC1BQ86YN6 1023 aaKnown RBP14.22□□□□□ -0.13
PCDHA10-203ENST00000562220 ITGAEP38570 1179 aa14.19□□□□□ -0.14
PCDHA10-203ENST00000562220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.17□□□□□ -0.14
PCDHA10-203ENST00000562220 HNRNPUL2Q1KMD3 747 aaKnown RBP14.17□□□□□ -0.14
PCDHA10-203ENST00000562220 SLC4A1APQ9BWU0 796 aaKnown RBP14.1□□□□□ -0.15
PCDHA10-203ENST00000562220 DIEXFQ68CQ4 756 aaKnown RBP14.05□□□□□ -0.16
PCDHA10-203ENST00000562220 CNGB1Q14028 1251 aaPredicted RBP14.01□□□□□ -0.17
PCDHA10-203ENST00000562220 ZBTB47Q9UFB7 747 aaPredicted RBP14□□□□□ -0.17
PCDHA10-203ENST00000562220 CDK11AQ9UQ88 783 aaPredicted RBP13.96□□□□□ -0.17
PCDHA10-203ENST00000562220 ANP32CO43423 234 aa13.91□□□□□ -0.18
PCDHA10-203ENST00000562220 CHIC1Q5VXU3 224 aa13.91□□□□□ -0.18
PCDHA10-203ENST00000562220 LOC105371045A0A1W2PR82 267 aa13.87□□□□□ -0.19
PCDHA10-203ENST00000562220 CANXP27824 592 aaKnown RBP13.85□□□□□ -0.19
PCDHA10-203ENST00000562220 FAM50AQ14320 339 aaKnown RBP13.85□□□□□ -0.19
PCDHA10-203ENST00000562220 ANP32AP39687 249 aaKnown RBP13.82□□□□□ -0.2
PCDHA10-203ENST00000562220 BCANQ96GW7 911 aa13.82□□□□□ -0.2
PCDHA10-203ENST00000562220 TRIM52Q96A61 297 aa13.8□□□□□ -0.2
PCDHA10-203ENST00000562220 ANP32BQ92688 251 aaKnown RBP13.78□□□□□ -0.2
PCDHA10-203ENST00000562220 NEFMP07197 916 aa13.78□□□□□ -0.2
PCDHA10-203ENST00000562220 GTF3C3Q9Y5Q9 886 aa13.78□□□□□ -0.2
PCDHA10-203ENST00000562220 NEUROD1Q13562 356 aa13.75□□□□□ -0.21
PCDHA10-203ENST00000562220 ZNF326Q5BKZ1 582 aaKnown RBP13.69□□□□□ -0.22
PCDHA10-203ENST00000562220 GLIPR1L2Q4G1C9 344 aa13.67□□□□□ -0.22
PCDHA10-203ENST00000562220 HSP90AA1P07900 732 aaKnown RBP13.65□□□□□ -0.22
PCDHA10-203ENST00000562220 SLC24A1O60721 1099 aa13.62□□□□□ -0.23
PCDHA10-203ENST00000562220 UPF2Q9HAU5 1272 aaKnown RBP13.59□□□□□ -0.23
PCDHA10-203ENST00000562220 ACIN1Q9UKV3 1341 aaKnown RBP13.58□□□□□ -0.23
PCDHA10-203ENST00000562220 EIF5BO60841 1220 aaKnown RBP13.58□□□□□ -0.23
PCDHA10-203ENST00000562220 BCL11AQ9H165 835 aa13.58□□□□□ -0.24
PCDHA10-203ENST00000562220 NPM2Q86SE8 214 aaKnown RBP13.56□□□□□ -0.24
PCDHA10-203ENST00000562220 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.43□□□□□ -0.26
PCDHA10-203ENST00000562220 TONSLQ96HA7 1378 aa13.42□□□□□ -0.26
PCDHA10-203ENST00000562220 FKBP8Q14318 412 aa13.37□□□□□ -0.27
PCDHA10-203ENST00000562220 CCDC136Q96JN2 1154 aa13.36□□□□□ -0.27
PCDHA10-203ENST00000562220 ESF1Q9H501 851 aaKnown RBP13.34□□□□□ -0.27
PCDHA10-203ENST00000562220 HNRNPUQ00839 825 aaKnown RBP eCLIP13.34□□□□□ -0.27
PCDHA10-203ENST00000562220 ANP32EQ9BTT0 268 aa13.33□□□□□ -0.27
PCDHA10-203ENST00000562220 FBLN2P98095 1184 aa13.33□□□□□ -0.28
PCDHA10-203ENST00000562220 CDK11BP21127 795 aaKnown RBP13.33□□□□□ -0.28
PCDHA10-203ENST00000562220 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
PCDHA10-203ENST00000562220 DCAF1Q9Y4B6 1507 aa13.31□□□□□ -0.28
PCDHA10-203ENST00000562220 NBR1Q14596 966 aa13.31□□□□□ -0.28
PCDHA10-203ENST00000562220 BECN1Q14457 450 aa13.29□□□□□ -0.28
PCDHA10-203ENST00000562220 DDRGK1Q96HY6 314 aa13.28□□□□□ -0.28
PCDHA10-203ENST00000562220 STAG3Q9UJ98 1225 aa13.28□□□□□ -0.28
PCDHA10-203ENST00000562220 TNNT2P45379 298 aaPredicted RBP13.28□□□□□ -0.28
PCDHA10-203ENST00000562220 ZNF777Q9ULD5 760 aaPredicted RBP13.28□□□□□ -0.28
PCDHA10-203ENST00000562220 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
PCDHA10-203ENST00000562220 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
PCDHA10-203ENST00000562220 ABCC9O60706 1549 aa13.24□□□□□ -0.29
PCDHA10-203ENST00000562220 WDR43Q15061 677 aaKnown RBP eCLIP13.24□□□□□ -0.29
PCDHA10-203ENST00000562220 FAM9BQ8IZU0 186 aa13.24□□□□□ -0.29
PCDHA10-203ENST00000562220 TMC1Q8TDI8 760 aa13.24□□□□□ -0.29
PCDHA10-203ENST00000562220 GOLGA6L22H0YM25 854 aa13.24□□□□□ -0.29
PCDHA10-203ENST00000562220 ARXQ96QS3 562 aa13.21□□□□□ -0.29
PCDHA10-203ENST00000562220 P3H3Q8IVL6 736 aa13.21□□□□□ -0.29
PCDHA10-203ENST00000562220 NCLP19338 710 aaKnown RBP13.2□□□□□ -0.3
PCDHA10-203ENST00000562220 ARID3CA6NKF2 412 aa13.2□□□□□ -0.3
PCDHA10-203ENST00000562220 TRIM44Q96DX7 344 aaPredicted RBP13.2□□□□□ -0.3
PCDHA10-203ENST00000562220 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
PCDHA10-203ENST00000562220 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
PCDHA10-203ENST00000562220 MRS2Q9HD23 443 aa13.17□□□□□ -0.3
PCDHA10-203ENST00000562220 SCRIBQ14160 1630 aa13.14□□□□□ -0.31
PCDHA10-203ENST00000562220 PTMAP06454 111 aaKnown RBP13.12□□□□□ -0.31
PCDHA10-203ENST00000562220 ZRSR1Q15695 479 aaKnown RBP13.1□□□□□ -0.31
PCDHA10-203ENST00000562220 CCDC180Q9P1Z9 1646 aa13.1□□□□□ -0.31
PCDHA10-203ENST00000562220 SALL2Q9Y467 1007 aaPredicted RBP13.1□□□□□ -0.31
PCDHA10-203ENST00000562220 CASC1Q6TDU7 716 aa13.09□□□□□ -0.31
PCDHA10-203ENST00000562220 ERICH6BQ5W0A0 696 aa13.08□□□□□ -0.32
PCDHA10-203ENST00000562220 KAT6BQ8WYB5 2073 aa13.07□□□□□ -0.32
PCDHA10-203ENST00000562220 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms