RNA–Protein interactions for RNA: ENST00000417606.2

SRRM5-201, Transcript of serine/arginine repetitive matrix 5, humanhuman

APPRIS P1 BASIC

Gene SRRM5, Length 2,381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5-201ENST00000417606 NISCHQ9Y2I1 1504 aa23.51■■□□□ 1.35
SRRM5-201ENST00000417606 HRCP23327 699 aa20.75■□□□□ 0.91
SRRM5-201ENST00000417606 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
SRRM5-201ENST00000417606 PELP1Q8IZL8 1130 aaKnown RBP20.44■□□□□ 0.86
SRRM5-201ENST00000417606 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
SRRM5-201ENST00000417606 SHROOM4Q9ULL8 1493 aa20.28■□□□□ 0.84
SRRM5-201ENST00000417606 SUPT5HO00267 1087 aaKnown RBP20.18■□□□□ 0.82
SRRM5-201ENST00000417606 MYO15BQ96JP2 1530 aa20.18■□□□□ 0.82
SRRM5-201ENST00000417606 PCGF6Q9BYE7 350 aa20.16■□□□□ 0.82
SRRM5-201ENST00000417606 CHIC1Q5VXU3 224 aa19.88■□□□□ 0.77
SRRM5-201ENST00000417606 DCAF1Q9Y4B6 1507 aa19.76■□□□□ 0.75
SRRM5-201ENST00000417606 MYT1Q01538 1121 aa19.75■□□□□ 0.75
SRRM5-201ENST00000417606 SCAF1Q9H7N4 1312 aaKnown RBP19.73■□□□□ 0.75
SRRM5-201ENST00000417606 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
SRRM5-201ENST00000417606 ABCC9O60706 1549 aa19.61■□□□□ 0.73
SRRM5-201ENST00000417606 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
SRRM5-201ENST00000417606 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
SRRM5-201ENST00000417606 TRIM26Q12899 539 aaPredicted RBP19.48■□□□□ 0.71
SRRM5-201ENST00000417606 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
SRRM5-201ENST00000417606 ACIN1Q9UKV3 1341 aaKnown RBP19.19■□□□□ 0.66
SRRM5-201ENST00000417606 NACADO15069 1562 aa19.17■□□□□ 0.66
SRRM5-201ENST00000417606 NEUROD1Q13562 356 aa19.08■□□□□ 0.64
SRRM5-201ENST00000417606 RB1CC1Q8TDY2 1594 aa19.05■□□□□ 0.64
SRRM5-201ENST00000417606 GTF3C3Q9Y5Q9 886 aa18.98■□□□□ 0.63
SRRM5-201ENST00000417606 SCRIBQ14160 1630 aa18.94■□□□□ 0.62
SRRM5-201ENST00000417606 CENPBP07199 599 aaPredicted RBP18.89■□□□□ 0.61
SRRM5-201ENST00000417606 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.58
SRRM5-201ENST00000417606 DIEXFQ68CQ4 756 aaKnown RBP18.69■□□□□ 0.58
SRRM5-201ENST00000417606 FAM9AQ8IZU1 332 aaPredicted RBP18.69■□□□□ 0.58
SRRM5-201ENST00000417606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.67■□□□□ 0.58
SRRM5-201ENST00000417606 EHMT2Q96KQ7 1210 aa18.67■□□□□ 0.58
SRRM5-201ENST00000417606 TTBK1Q5TCY1 1321 aaPredicted RBP18.63■□□□□ 0.57
SRRM5-201ENST00000417606 TRIM41Q8WV44 630 aa18.59■□□□□ 0.57
SRRM5-201ENST00000417606 CCER1Q8TC90 406 aaPredicted RBP18.56■□□□□ 0.56
SRRM5-201ENST00000417606 BICRAQ9NZM4 1560 aa18.5■□□□□ 0.55
SRRM5-201ENST00000417606 PABPN1Q86U42 306 aaKnown RBP eCLIP18.47■□□□□ 0.55
SRRM5-201ENST00000417606 YTHDC1Q96MU7 727 aaKnown RBP18.4■□□□□ 0.54
SRRM5-201ENST00000417606 RSF1Q96T23 1441 aaPredicted RBP18.35■□□□□ 0.53
SRRM5-201ENST00000417606 BCL11AQ9H165 835 aa18.33■□□□□ 0.52
SRRM5-201ENST00000417606 CECR2Q9BXF3 1484 aa18.31■□□□□ 0.52
SRRM5-201ENST00000417606 ZNF316A6NFI3 1004 aaPredicted RBP18.31■□□□□ 0.52
SRRM5-201ENST00000417606 ANP32EQ9BTT0 268 aa18.23■□□□□ 0.51
SRRM5-201ENST00000417606 MIER1Q8N108 512 aa18.2■□□□□ 0.5
SRRM5-201ENST00000417606 MROH2BQ7Z745 1585 aa18.18■□□□□ 0.5
SRRM5-201ENST00000417606 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
SRRM5-201ENST00000417606 CLSPNQ9HAW4 1339 aa18.16■□□□□ 0.5
SRRM5-201ENST00000417606 SMARCA4P51532 1647 aa18.12■□□□□ 0.49
SRRM5-201ENST00000417606 SUPT16HQ9Y5B9 1047 aaKnown RBP18.06■□□□□ 0.48
SRRM5-201ENST00000417606 TSHZ2Q9NRE2 1034 aa18.06■□□□□ 0.48
SRRM5-201ENST00000417606 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
SRRM5-201ENST00000417606 WIZO95785 1651 aa18.04■□□□□ 0.48
SRRM5-201ENST00000417606 CSRNP3Q8WYN3 585 aa17.99■□□□□ 0.47
SRRM5-201ENST00000417606 EIF4G1Q04637 1599 aaKnown RBP17.95■□□□□ 0.46
SRRM5-201ENST00000417606 CEP162Q5TB80 1403 aa17.9■□□□□ 0.46
SRRM5-201ENST00000417606 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
SRRM5-201ENST00000417606 ATAD2BQ9ULI0 1458 aa17.84■□□□□ 0.45
SRRM5-201ENST00000417606 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
SRRM5-201ENST00000417606 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
SRRM5-201ENST00000417606 HNRNPUL2Q1KMD3 747 aaKnown RBP17.79■□□□□ 0.44
SRRM5-201ENST00000417606 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
SRRM5-201ENST00000417606 ABCC8Q09428 1581 aa17.75■□□□□ 0.43
SRRM5-201ENST00000417606 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
SRRM5-201ENST00000417606 PRKCSHP14314 528 aaPredicted RBP17.74■□□□□ 0.43
SRRM5-201ENST00000417606 CC2D2AQ9P2K1 1620 aa17.73■□□□□ 0.43
SRRM5-201ENST00000417606 TNIKQ9UKE5 1360 aa17.72■□□□□ 0.43
SRRM5-201ENST00000417606 SOGA1O94964 1423 aa17.7■□□□□ 0.42
SRRM5-201ENST00000417606 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
SRRM5-201ENST00000417606 HMGXB3Q12766 1538 aa17.67■□□□□ 0.42
SRRM5-201ENST00000417606 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
SRRM5-201ENST00000417606 UBTFP17480 764 aaKnown RBP17.62■□□□□ 0.41
SRRM5-201ENST00000417606 BCANQ96GW7 911 aa17.6■□□□□ 0.41
SRRM5-201ENST00000417606 RBM19Q9Y4C8 960 aaKnown RBP17.59■□□□□ 0.41
SRRM5-201ENST00000417606 KCNH8Q96L42 1107 aa17.55■□□□□ 0.4
SRRM5-201ENST00000417606 GOLGA3Q08378 1498 aa17.49■□□□□ 0.39
SRRM5-201ENST00000417606 EEA1Q15075 1411 aa17.48■□□□□ 0.39
SRRM5-201ENST00000417606 MSH5O43196 834 aa17.47■□□□□ 0.39
SRRM5-201ENST00000417606 FKBP8Q14318 412 aa17.47■□□□□ 0.39
SRRM5-201ENST00000417606 DHX57Q6P158 1386 aaKnown RBP17.46■□□□□ 0.39
SRRM5-201ENST00000417606 ERICH6Q7L0X2 663 aa17.42■□□□□ 0.38
SRRM5-201ENST00000417606 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
SRRM5-201ENST00000417606 CLIP1P30622 1438 aa17.4■□□□□ 0.38
SRRM5-201ENST00000417606 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
SRRM5-201ENST00000417606 VPS8Q8N3P4 1428 aa17.37■□□□□ 0.37
SRRM5-201ENST00000417606 ITGAEP38570 1179 aa17.35■□□□□ 0.37
SRRM5-201ENST00000417606 MYT1LQ9UL68 1186 aa17.35■□□□□ 0.37
SRRM5-201ENST00000417606 NEFLP07196 543 aa17.32■□□□□ 0.36
SRRM5-201ENST00000417606 RANGAP1P46060 587 aaPredicted RBP17.3■□□□□ 0.36
SRRM5-201ENST00000417606 APLP2Q06481 763 aa17.29■□□□□ 0.36
SRRM5-201ENST00000417606 CEP164Q9UPV0 1460 aa17.29■□□□□ 0.36
SRRM5-201ENST00000417606 CFTRP13569 1480 aa17.28■□□□□ 0.36
SRRM5-201ENST00000417606 KIF21BO75037 1637 aa17.27■□□□□ 0.36
SRRM5-201ENST00000417606 CADPSQ9ULU8 1353 aa17.24■□□□□ 0.35
SRRM5-201ENST00000417606 DEKP35659 375 aaKnown RBP17.21■□□□□ 0.35
SRRM5-201ENST00000417606 RAPGEF2Q9Y4G8 1499 aa17.2■□□□□ 0.34
SRRM5-201ENST00000417606 PRDM2Q13029 1718 aa17.19■□□□□ 0.34
SRRM5-201ENST00000417606 TRIM52Q96A61 297 aa17.18■□□□□ 0.34
SRRM5-201ENST00000417606 NESP48681 1621 aa17.18■□□□□ 0.34
SRRM5-201ENST00000417606 DDX10Q13206 875 aaKnown RBP17.17■□□□□ 0.34
SRRM5-201ENST00000417606 CUX2O14529 1486 aa17.17■□□□□ 0.34
SRRM5-201ENST00000417606 SYNJ1O43426 1573 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms