RNA–Protein interactions for RNA: ENST00000446488.7

NFRKB-201, Transcript of nuclear factor related to kappaB binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NFRKB, Length 5,093 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-201ENST00000446488 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
NFRKB-201ENST00000446488 NISCHQ9Y2I1 1504 aa19.13■□□□□ 0.65
NFRKB-201ENST00000446488 SUPT5HO00267 1087 aaKnown RBP18.14■□□□□ 0.49
NFRKB-201ENST00000446488 SHROOM4Q9ULL8 1493 aa17.99■□□□□ 0.47
NFRKB-201ENST00000446488 FAM9AQ8IZU1 332 aaPredicted RBP17.87■□□□□ 0.45
NFRKB-201ENST00000446488 APLP2Q06481 763 aa17.49■□□□□ 0.39
NFRKB-201ENST00000446488 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
NFRKB-201ENST00000446488 PELP1Q8IZL8 1130 aaKnown RBP17.11■□□□□ 0.33
NFRKB-201ENST00000446488 ATP1B4Q9UN42 357 aaPredicted RBP17.01■□□□□ 0.31
NFRKB-201ENST00000446488 ABCC9O60706 1549 aa17■□□□□ 0.31
NFRKB-201ENST00000446488 TRIM41Q8WV44 630 aa16.98■□□□□ 0.31
NFRKB-201ENST00000446488 RANGAP1P46060 587 aaPredicted RBP16.97■□□□□ 0.31
NFRKB-201ENST00000446488 PCGF6Q9BYE7 350 aa16.87■□□□□ 0.29
NFRKB-201ENST00000446488 UBTFP17480 764 aaKnown RBP16.85■□□□□ 0.29
NFRKB-201ENST00000446488 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.283e-6■■■□□ 16.3
NFRKB-201ENST00000446488 ZEB1P37275 1124 aaPredicted RBP16.76■□□□□ 0.27
NFRKB-201ENST00000446488 TTBK1Q5TCY1 1321 aaPredicted RBP16.71■□□□□ 0.27
NFRKB-201ENST00000446488 MYT1Q01538 1121 aa16.71■□□□□ 0.27
NFRKB-201ENST00000446488 MYT1LQ9UL68 1186 aa16.7■□□□□ 0.26
NFRKB-201ENST00000446488 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
NFRKB-201ENST00000446488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.66■□□□□ 0.26
NFRKB-201ENST00000446488 HNRNPUL2Q1KMD3 747 aaKnown RBP16.66■□□□□ 0.26
NFRKB-201ENST00000446488 HRCP23327 699 aa16.41■□□□□ 0.22
NFRKB-201ENST00000446488 CCER1Q8TC90 406 aaPredicted RBP16.39■□□□□ 0.21
NFRKB-201ENST00000446488 FBLN2P98095 1184 aa16.32■□□□□ 0.2
NFRKB-201ENST00000446488 ERICH6Q7L0X2 663 aa16.32■□□□□ 0.2
NFRKB-201ENST00000446488 TRIM26Q12899 539 aaPredicted RBP16.24■□□□□ 0.19
NFRKB-201ENST00000446488 CHIC1Q5VXU3 224 aa16.14■□□□□ 0.17
NFRKB-201ENST00000446488 ITGAEP38570 1179 aa16.1■□□□□ 0.17
NFRKB-201ENST00000446488 YTHDC1Q96MU7 727 aaKnown RBP16.1■□□□□ 0.17
NFRKB-201ENST00000446488 NEFLP07196 543 aa16.08■□□□□ 0.16
NFRKB-201ENST00000446488 SCRIBQ14160 1630 aa16.02■□□□□ 0.16
NFRKB-201ENST00000446488 NPM1P06748 294 aaKnown RBP eCLIP16■□□□□ 0.15
NFRKB-201ENST00000446488 PPARGC1BQ86YN6 1023 aaKnown RBP15.96■□□□□ 0.14
NFRKB-201ENST00000446488 RB1CC1Q8TDY2 1594 aa15.93■□□□□ 0.14
NFRKB-201ENST00000446488 CCDC180Q9P1Z9 1646 aa15.92■□□□□ 0.14
NFRKB-201ENST00000446488 ESF1Q9H501 851 aaKnown RBP15.89■□□□□ 0.13
NFRKB-201ENST00000446488 POLR3GLQ9BT43 218 aa15.89■□□□□ 0.13
NFRKB-201ENST00000446488 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
NFRKB-201ENST00000446488 FAM50AQ14320 339 aaKnown RBP15.86■□□□□ 0.13
NFRKB-201ENST00000446488 CDK11AQ9UQ88 783 aaPredicted RBP15.86■□□□□ 0.13
NFRKB-201ENST00000446488 LOC105371045A0A1W2PR82 267 aa15.82■□□□□ 0.12
NFRKB-201ENST00000446488 TRIM52Q96A61 297 aa15.8■□□□□ 0.12
NFRKB-201ENST00000446488 BCANQ96GW7 911 aa15.77■□□□□ 0.12
NFRKB-201ENST00000446488 ZCCHC6Q5VYS8 1495 aaKnown RBP15.74■□□□□ 0.11
NFRKB-201ENST00000446488 CHMP7Q8WUX9 453 aaPredicted RBP15.71■□□□□ 0.11
NFRKB-201ENST00000446488 DIEXFQ68CQ4 756 aaKnown RBP15.71■□□□□ 0.11
NFRKB-201ENST00000446488 NACADO15069 1562 aa15.69■□□□□ 0.1
NFRKB-201ENST00000446488 ARID3CA6NKF2 412 aa15.69■□□□□ 0.1
NFRKB-201ENST00000446488 P3H3Q8IVL6 736 aa15.69■□□□□ 0.1
NFRKB-201ENST00000446488 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
NFRKB-201ENST00000446488 ZNF777Q9ULD5 760 aaPredicted RBP15.64■□□□□ 0.09
NFRKB-201ENST00000446488 ERCC6Q03468 1493 aa15.6■□□□□ 0.09
NFRKB-201ENST00000446488 STAG3Q9UJ98 1225 aa15.59■□□□□ 0.09
NFRKB-201ENST00000446488 GTF3C3Q9Y5Q9 886 aa15.56■□□□□ 0.08
NFRKB-201ENST00000446488 PLPPR3Q6T4P5 718 aa15.54■□□□□ 0.08
NFRKB-201ENST00000446488 CNGB1Q14028 1251 aaPredicted RBP15.53■□□□□ 0.08
NFRKB-201ENST00000446488 ZNF326Q5BKZ1 582 aaKnown RBP15.5■□□□□ 0.07
NFRKB-201ENST00000446488 DAXXQ9UER7 740 aaPredicted RBP15.49■□□□□ 0.07
NFRKB-201ENST00000446488 BAZ1BQ9UIG0 1483 aaKnown RBP15.46■□□□□ 0.07
NFRKB-201ENST00000446488 ACIN1Q9UKV3 1341 aaKnown RBP15.45■□□□□ 0.06
NFRKB-201ENST00000446488 CHGAP10645 457 aaKnown RBP15.42■□□□□ 0.06
NFRKB-201ENST00000446488 NEUROD1Q13562 356 aa15.42■□□□□ 0.06
NFRKB-201ENST00000446488 NEFMP07197 916 aa15.4■□□□□ 0.06
NFRKB-201ENST00000446488 RTL5Q5HYW3 569 aaPredicted RBP15.39■□□□□ 0.05
NFRKB-201ENST00000446488 TSPY4P0CV99 314 aa15.37■□□□□ 0.05
NFRKB-201ENST00000446488 TSPY10P0CW01 314 aa15.37■□□□□ 0.05
NFRKB-201ENST00000446488 ZNF316A6NFI3 1004 aaPredicted RBP15.34■□□□□ 0.05
NFRKB-201ENST00000446488 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.05
NFRKB-201ENST00000446488 SLC24A1O60721 1099 aa15.32■□□□□ 0.04
NFRKB-201ENST00000446488 PLEKHD1A6NEE1 506 aa15.31■□□□□ 0.04
NFRKB-201ENST00000446488 KCNH8Q96L42 1107 aa15.3■□□□□ 0.04
NFRKB-201ENST00000446488 ARID4BQ4LE39 1312 aaPredicted RBP15.3■□□□□ 0.04
NFRKB-201ENST00000446488 DCAF1Q9Y4B6 1507 aa15.25■□□□□ 0.03
NFRKB-201ENST00000446488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.24■□□□□ 0.033e-8■■□□□ 13.6
NFRKB-201ENST00000446488 MTUS2Q5JR59 1369 aa15.24■□□□□ 0.03
NFRKB-201ENST00000446488 CLSPNQ9HAW4 1339 aa15.22■□□□□ 0.03
NFRKB-201ENST00000446488 ZBTB47Q9UFB7 747 aaPredicted RBP15.2■□□□□ 0.02
NFRKB-201ENST00000446488 PDS5BQ9NTI5 1447 aa15.2■□□□□ 0.02
NFRKB-201ENST00000446488 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
NFRKB-201ENST00000446488 PPP1R15AO75807 674 aaPredicted RBP15.19■□□□□ 0.02
NFRKB-201ENST00000446488 KIF27Q86VH2 1401 aa15.16■□□□□ 0.02
NFRKB-201ENST00000446488 C14orf37Q86TY3 774 aa15.15■□□□□ 0.02
NFRKB-201ENST00000446488 ANP32CO43423 234 aa15.15■□□□□ 0.02
NFRKB-201ENST00000446488 RSF1Q96T23 1441 aaPredicted RBP15.14■□□□□ 0.01
NFRKB-201ENST00000446488 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
NFRKB-201ENST00000446488 SCAF1Q9H7N4 1312 aaKnown RBP15.11■□□□□ 0.01
NFRKB-201ENST00000446488 CHIC2Q9UKJ5 165 aa15.11■□□□□ 0.01
NFRKB-201ENST00000446488 EEA1Q15075 1411 aa15.1■□□□□ 0.01
NFRKB-201ENST00000446488 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
NFRKB-201ENST00000446488 SMARCA2P51531 1590 aa15.05■□□□□ 0
NFRKB-201ENST00000446488 TONSLQ96HA7 1378 aa15.04■□□□□ -0
NFRKB-201ENST00000446488 CFDP1Q9UEE9 299 aaPredicted RBP15.04■□□□□ -0
NFRKB-201ENST00000446488 CANXP27824 592 aaKnown RBP15.02■□□□□ -0
NFRKB-201ENST00000446488 HAP1P54257 671 aaPredicted RBP15.02□□□□□ -0.01
NFRKB-201ENST00000446488 CLIP1P30622 1438 aa15□□□□□ -0.01
NFRKB-201ENST00000446488 NPM2Q86SE8 214 aaKnown RBP14.97□□□□□ -0.01
NFRKB-201ENST00000446488 CARMIL2Q6F5E8 1435 aa14.96□□□□□ -0.01
NFRKB-201ENST00000446488 A0A0G2JS52 829 aa14.96□□□□□ -0.01
NFRKB-201ENST00000446488 GOLGA3Q08378 1498 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms