Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 MTHFR-210ENST00000641407 2387 ntBASIC16.79■□□□□ 0.28
SLF1Q9BQI6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SLF1Q9BQI6 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 AL583805.1-201ENST00000391389 531 ntBASIC16.78■□□□□ 0.28
SLF1Q9BQI6 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 RPSAP15-201ENST00000448168 861 ntBASIC16.78■□□□□ 0.28
SLF1Q9BQI6 AP000358.1-201ENST00000456260 156 ntBASIC16.78■□□□□ 0.28
SLF1Q9BQI6 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 MIR5572-201ENST00000583188 137 ntBASIC16.78■□□□□ 0.28
SLF1Q9BQI6 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 AC073352.2-201ENST00000609385 439 ntBASIC16.78■□□□□ 0.28
SLF1Q9BQI6 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLF1Q9BQI6 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 AC097359.2-201ENST00000604992 2389 ntBASIC16.77■□□□□ 0.28
SLF1Q9BQI6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 AL592076.1-201ENST00000424448 303 ntBASIC16.77■□□□□ 0.28
SLF1Q9BQI6 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 DUX4L50-201ENST00000455245 715 ntBASIC16.77■□□□□ 0.28
SLF1Q9BQI6 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.77■□□□□ 0.28
SLF1Q9BQI6 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms