Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM47Q96LD4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 BANF1P3-201ENST00000412556 261 ntBASIC16.91■□□□□ 0.3
TRIM47Q96LD4 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 AL807761.2-201ENST00000422849 729 ntBASIC16.91■□□□□ 0.3
TRIM47Q96LD4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 AL645933.1-201ENST00000440087 609 ntBASIC16.91■□□□□ 0.3
TRIM47Q96LD4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 ALG1L6P-201ENST00000515248 758 ntBASIC16.91■□□□□ 0.3
TRIM47Q96LD4 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 C2orf69P1-201ENST00000563532 1093 ntBASIC16.91■□□□□ 0.3
TRIM47Q96LD4 AL022344.2-201ENST00000568976 968 ntBASIC16.91■□□□□ 0.3
TRIM47Q96LD4 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 KRT18P9-201ENST00000604826 1300 ntBASIC16.91■□□□□ 0.3
TRIM47Q96LD4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRIM47Q96LD4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 HIST2H2BA-201ENST00000412169 381 ntBASIC16.9■□□□□ 0.3
TRIM47Q96LD4 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.9■□□□□ 0.3
TRIM47Q96LD4 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRIM47Q96LD4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms