Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 AL359845.1-201ENST00000458202 1648 ntBASIC12.07□□□□□ -0.48
ZNF546Q86UE3 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
ZNF546Q86UE3 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.06□□□□□ -0.48
ZNF546Q86UE3 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 KRT18P64-201ENST00000434946 1219 ntBASIC12.06□□□□□ -0.48
ZNF546Q86UE3 AL592309.1-201ENST00000443127 649 ntBASIC12.06□□□□□ -0.48
ZNF546Q86UE3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 FAM197Y3-203ENST00000618346 717 ntBASIC12.06□□□□□ -0.48
ZNF546Q86UE3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 DNM1P41-201ENST00000623634 3350 ntBASIC12.06□□□□□ -0.48
ZNF546Q86UE3 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 AL121723.1-201ENST00000445194 1519 ntBASIC12.06□□□□□ -0.48
ZNF546Q86UE3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ZNF546Q86UE3 AL136172.1-201ENST00000598590 1394 ntBASIC12.05□□□□□ -0.48
ZNF546Q86UE3 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 AC010336.1-201ENST00000539278 4739 ntBASIC12.05□□□□□ -0.48
ZNF546Q86UE3 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.05□□□□□ -0.48
ZNF546Q86UE3 AC069335.1-201ENST00000489972 472 ntBASIC12.05□□□□□ -0.48
ZNF546Q86UE3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms