Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 PCDHB18P-202ENST00000526308 3197 ntBASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LINC00242Q5T6M2 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 CLUHP2-201ENST00000426660 1303 ntBASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 ACKR1-201ENST00000368121 1240 ntBASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 PGGT1BP2-201ENST00000398621 1028 ntBASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 AC004890.2-204ENST00000481968 304 ntBASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 MESTP3-201ENST00000503460 968 ntBASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 MIR8072-201ENST00000614241 80 ntBASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 AL390754.1-201ENST00000619088 582 ntBASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 AP002761.4-201ENST00000565433 3361 ntBASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LINC00242Q5T6M2 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LINC00242Q5T6M2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 325.5 ms