Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
RPS3AP61247 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RPS3AP61247 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPS3AP61247 AC011700.1-201ENST00000610409 2627 ntBASIC13.69□□□□□ -0.22
RPS3AP61247 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPS3AP61247 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RPS3AP61247 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RPS3AP61247 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.69□□□□□ -0.22
RPS3AP61247 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.69□□□□□ -0.22
RPS3AP61247 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RPS3AP61247 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RPS3AP61247 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.68□□□□□ -0.22
RPS3AP61247 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.68□□□□□ -0.22
RPS3AP61247 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.68□□□□□ -0.22
RPS3AP61247 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
RPS3AP61247 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RPS3AP61247 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
RPS3AP61247 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 AC004899.2-201ENST00000622993 3860 ntBASIC13.68□□□□□ -0.22
RPS3AP61247 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.68□□□□□ -0.22
RPS3AP61247 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RPS3AP61247 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.68□□□□□ -0.22
RPS3AP61247 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.68□□□□□ -0.22
RPS3AP61247 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.68□□□□□ -0.22
RPS3AP61247 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.68□□□□□ -0.22
RPS3AP61247 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.68□□□□□ -0.22
RPS3AP61247 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.68□□□□□ -0.22
RPS3AP61247 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.68□□□□□ -0.22
RPS3AP61247 CROCCP4-201ENST00000457096 498 ntBASIC13.68□□□□□ -0.22
RPS3AP61247 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.68□□□□□ -0.22
RPS3AP61247 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.68□□□□□ -0.22
RPS3AP61247 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
RPS3AP61247 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.68□□□□□ -0.22
RPS3AP61247 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.68□□□□□ -0.22
RPS3AP61247 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.68□□□□□ -0.22
RPS3AP61247 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.68□□□□□ -0.22
RPS3AP61247 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RPS3AP61247 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.68□□□□□ -0.22
RPS3AP61247 AC132938.4-201ENST00000623835 848 ntBASIC13.68□□□□□ -0.22
RPS3AP61247 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
RPS3AP61247 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.68□□□□□ -0.22
RPS3AP61247 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.68□□□□□ -0.22
RPS3AP61247 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.68□□□□□ -0.22
RPS3AP61247 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.68□□□□□ -0.22
RPS3AP61247 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RPS3AP61247 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 AC073548.1-201ENST00000624088 1882 ntBASIC13.67□□□□□ -0.22
RPS3AP61247 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RPS3AP61247 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RPS3AP61247 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RPS3AP61247 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.67□□□□□ -0.22
RPS3AP61247 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.67□□□□□ -0.22
RPS3AP61247 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.67□□□□□ -0.22
RPS3AP61247 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
RPS3AP61247 REXO1L4P-201ENST00000605109 1937 ntBASIC13.67□□□□□ -0.22
RPS3AP61247 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.67□□□□□ -0.22
RPS3AP61247 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 MIR658-201ENST00000385210 100 ntBASIC13.67□□□□□ -0.22
RPS3AP61247 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.67□□□□□ -0.22
RPS3AP61247 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.67□□□□□ -0.22
RPS3AP61247 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPS3AP61247 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
RPS3AP61247 CTBP2P5-201ENST00000454986 1264 ntBASIC13.67□□□□□ -0.22
RPS3AP61247 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.67□□□□□ -0.22
RPS3AP61247 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.67□□□□□ -0.22
RPS3AP61247 AC025279.2-201ENST00000569730 653 ntBASIC13.67□□□□□ -0.22
RPS3AP61247 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.67□□□□□ -0.22
RPS3AP61247 AL008721.1-201ENST00000609964 604 ntBASIC13.67□□□□□ -0.22
RPS3AP61247 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.67□□□□□ -0.22
RPS3AP61247 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms