Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
PPP3CBP16298 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PPP3CBP16298 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.09□□□□□ -0.31
PPP3CBP16298 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PPP3CBP16298 CICP11-201ENST00000434745 2827 ntBASIC13.09□□□□□ -0.31
PPP3CBP16298 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.09□□□□□ -0.31
PPP3CBP16298 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PPP3CBP16298 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PPP3CBP16298 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.09□□□□□ -0.31
PPP3CBP16298 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PPP3CBP16298 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.09□□□□□ -0.31
PPP3CBP16298 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PPP3CBP16298 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PPP3CBP16298 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PPP3CBP16298 DMBT1P1-203ENST00000636837 4628 ntBASIC13.09□□□□□ -0.31
PPP3CBP16298 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PPP3CBP16298 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.09□□□□□ -0.31
PPP3CBP16298 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PPP3CBP16298 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PPP3CBP16298 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PPP3CBP16298 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
PPP3CBP16298 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
PPP3CBP16298 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 AL137783.1-201ENST00000623494 1896 ntBASIC13.08□□□□□ -0.32
PPP3CBP16298 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 MTHFR-210ENST00000641407 2387 ntBASIC13.08□□□□□ -0.32
PPP3CBP16298 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
PPP3CBP16298 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
PPP3CBP16298 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.08□□□□□ -0.32
PPP3CBP16298 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
PPP3CBP16298 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PPP3CBP16298 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.08□□□□□ -0.32
PPP3CBP16298 RN7SKP175-201ENST00000408472 289 ntBASIC13.08□□□□□ -0.32
PPP3CBP16298 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.08□□□□□ -0.32
PPP3CBP16298 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
PPP3CBP16298 BX284668.4-201ENST00000453917 508 ntBASIC13.08□□□□□ -0.32
PPP3CBP16298 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.08□□□□□ -0.32
PPP3CBP16298 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.08□□□□□ -0.32
PPP3CBP16298 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.08□□□□□ -0.32
PPP3CBP16298 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.08□□□□□ -0.32
PPP3CBP16298 AC138696.2-201ENST00000607376 223 ntBASIC13.08□□□□□ -0.32
PPP3CBP16298 AC002472.3-201ENST00000640124 621 ntBASIC13.08□□□□□ -0.32
PPP3CBP16298 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
PPP3CBP16298 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.08□□□□□ -0.32
PPP3CBP16298 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PPP3CBP16298 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.08□□□□□ -0.32
PPP3CBP16298 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.08□□□□□ -0.32
PPP3CBP16298 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
PPP3CBP16298 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
PPP3CBP16298 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.08□□□□□ -0.32
PPP3CBP16298 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
PPP3CBP16298 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 KRT8P29-201ENST00000420409 1371 ntBASIC13.07□□□□□ -0.32
PPP3CBP16298 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.07□□□□□ -0.32
PPP3CBP16298 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
PPP3CBP16298 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.07□□□□□ -0.32
PPP3CBP16298 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
PPP3CBP16298 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.07□□□□□ -0.32
PPP3CBP16298 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.07□□□□□ -0.32
PPP3CBP16298 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.07□□□□□ -0.32
PPP3CBP16298 SERPINA13P-202ENST00000478994 924 ntBASIC13.07□□□□□ -0.32
PPP3CBP16298 AC021723.1-201ENST00000486306 515 ntBASIC13.07□□□□□ -0.32
PPP3CBP16298 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.07□□□□□ -0.32
PPP3CBP16298 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 AC106794.1-201ENST00000506935 792 ntBASIC13.07□□□□□ -0.32
PPP3CBP16298 ZNF767P-206ENST00000513792 565 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms