Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CYP3A4P08684 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CYP3A4P08684 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CYP3A4P08684 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.09■□□□□ 0.17
CYP3A4P08684 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.09■□□□□ 0.17
CYP3A4P08684 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CYP3A4P08684 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CYP3A4P08684 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 AC026748.1-201ENST00000624349 3251 ntBASIC16.09■□□□□ 0.17
CYP3A4P08684 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CYP3A4P08684 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.09■□□□□ 0.17
CYP3A4P08684 PPP1R2P4-201ENST00000424051 595 ntBASIC16.09■□□□□ 0.17
CYP3A4P08684 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.09■□□□□ 0.17
CYP3A4P08684 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.09■□□□□ 0.17
CYP3A4P08684 AC019193.1-201ENST00000506678 823 ntBASIC16.09■□□□□ 0.17
CYP3A4P08684 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.09■□□□□ 0.17
CYP3A4P08684 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.09■□□□□ 0.17
CYP3A4P08684 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.09■□□□□ 0.17
CYP3A4P08684 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.09■□□□□ 0.17
CYP3A4P08684 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CYP3A4P08684 AC007326.1-201ENST00000604539 458 ntBASIC16.09■□□□□ 0.17
CYP3A4P08684 AC084346.2-201ENST00000607097 949 ntBASIC16.09■□□□□ 0.17
CYP3A4P08684 AL021707.6-201ENST00000609212 491 ntBASIC16.09■□□□□ 0.17
CYP3A4P08684 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.09■□□□□ 0.17
CYP3A4P08684 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CYP3A4P08684 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.09■□□□□ 0.17
CYP3A4P08684 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYP3A4P08684 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.09■□□□□ 0.17
CYP3A4P08684 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CYP3A4P08684 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CYP3A4P08684 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.08■□□□□ 0.17
CYP3A4P08684 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CYP3A4P08684 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CYP3A4P08684 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CYP3A4P08684 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CYP3A4P08684 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.08■□□□□ 0.17
CYP3A4P08684 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CYP3A4P08684 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.08■□□□□ 0.17
CYP3A4P08684 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CYP3A4P08684 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CYP3A4P08684 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.08■□□□□ 0.16
CYP3A4P08684 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.08■□□□□ 0.16
CYP3A4P08684 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.08■□□□□ 0.16
CYP3A4P08684 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.08■□□□□ 0.16
CYP3A4P08684 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 AC026316.1-201ENST00000398900 414 ntBASIC16.08■□□□□ 0.16
CYP3A4P08684 AL592076.1-201ENST00000424448 303 ntBASIC16.08■□□□□ 0.16
CYP3A4P08684 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.08■□□□□ 0.16
CYP3A4P08684 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.08■□□□□ 0.16
CYP3A4P08684 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.08■□□□□ 0.16
CYP3A4P08684 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.08■□□□□ 0.16
CYP3A4P08684 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.08■□□□□ 0.16
CYP3A4P08684 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
CYP3A4P08684 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.08■□□□□ 0.16
CYP3A4P08684 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.08■□□□□ 0.16
CYP3A4P08684 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CYP3A4P08684 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYP3A4P08684 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.08■□□□□ 0.16
CYP3A4P08684 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CYP3A4P08684 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYP3A4P08684 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CYP3A4P08684 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CYP3A4P08684 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CYP3A4P08684 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.07■□□□□ 0.16
CYP3A4P08684 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYP3A4P08684 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYP3A4P08684 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CYP3A4P08684 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms