Protein–RNA interactions for Protein: O95696

BRD1, Bromodomain-containing protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1O95696 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.87■□□□□ 0.29
BRD1O95696 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRD1O95696 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
BRD1O95696 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRD1O95696 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.87■□□□□ 0.29
BRD1O95696 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
BRD1O95696 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRD1O95696 BEND3P3-201ENST00000611030 2440 ntBASIC16.87■□□□□ 0.29
BRD1O95696 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRD1O95696 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC16.87■□□□□ 0.29
BRD1O95696 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRD1O95696 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
BRD1O95696 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BRD1O95696 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
BRD1O95696 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
BRD1O95696 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.86■□□□□ 0.29
BRD1O95696 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
BRD1O95696 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
BRD1O95696 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 NME1-209ENST00000511355 1645 ntTSL 5 BASIC16.86■□□□□ 0.29
BRD1O95696 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
BRD1O95696 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
BRD1O95696 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.86■□□□□ 0.29
BRD1O95696 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.86■□□□□ 0.29
BRD1O95696 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.86■□□□□ 0.29
BRD1O95696 AC012441.1-201ENST00000446669 685 ntBASIC16.86■□□□□ 0.29
BRD1O95696 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
BRD1O95696 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.86■□□□□ 0.29
BRD1O95696 RN7SL219P-201ENST00000582872 296 ntBASIC16.86■□□□□ 0.29
BRD1O95696 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
BRD1O95696 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
BRD1O95696 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
BRD1O95696 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BRD1O95696 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC16.86■□□□□ 0.29
BRD1O95696 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.86■□□□□ 0.29
BRD1O95696 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
BRD1O95696 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 AC067750.1-201ENST00000608826 6545 ntBASIC16.85■□□□□ 0.29
BRD1O95696 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.85■□□□□ 0.29
BRD1O95696 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
BRD1O95696 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 BOLA2P3-201ENST00000404566 256 ntBASIC16.85■□□□□ 0.29
BRD1O95696 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.85■□□□□ 0.29
BRD1O95696 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.85■□□□□ 0.29
BRD1O95696 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 USP32P1-208ENST00000506594 1164 ntBASIC16.85■□□□□ 0.29
BRD1O95696 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.85■□□□□ 0.29
BRD1O95696 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.85■□□□□ 0.29
BRD1O95696 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.85■□□□□ 0.29
BRD1O95696 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.85■□□□□ 0.29
BRD1O95696 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
BRD1O95696 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.85■□□□□ 0.29
BRD1O95696 MIR6869-201ENST00000619434 62 ntBASIC16.85■□□□□ 0.29
BRD1O95696 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.85■□□□□ 0.29
BRD1O95696 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.85■□□□□ 0.29
BRD1O95696 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
BRD1O95696 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
BRD1O95696 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
BRD1O95696 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
BRD1O95696 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
BRD1O95696 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC16.85■□□□□ 0.29
BRD1O95696 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC16.85■□□□□ 0.29
BRD1O95696 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 AL359845.1-201ENST00000458202 1648 ntBASIC16.85■□□□□ 0.29
BRD1O95696 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
BRD1O95696 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BRD1O95696 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms