Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 AC003102.2-201ENST00000589195 1469 ntBASIC10.57□□□□□ -0.72
TNFRSF6BO95407 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 F2-205ENST00000530231 1849 ntTSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 AC140113.2-201ENST00000604370 208 ntBASIC10.57□□□□□ -0.72
TNFRSF6BO95407 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 IRF5-214ENST00000613821 595 ntTSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 CAND2-206ENST00000626378 333 ntTSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 AC105339.1-204ENST00000636249 355 ntBASIC10.57□□□□□ -0.72
TNFRSF6BO95407 AL109936.8-201ENST00000641772 604 ntBASIC10.57□□□□□ -0.72
TNFRSF6BO95407 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 MARK2P9-201ENST00000430958 1727 ntBASIC10.57□□□□□ -0.72
TNFRSF6BO95407 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 CARS-214ENST00000529772 2637 ntTSL 2 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 PCDHA6-201ENST00000378126 3267 ntBASIC10.57□□□□□ -0.72
TNFRSF6BO95407 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.57□□□□□ -0.72
TNFRSF6BO95407 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
TNFRSF6BO95407 LINC00567-201ENST00000569854 3409 ntBASIC10.56□□□□□ -0.72
TNFRSF6BO95407 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 RPL37AP1-201ENST00000412502 279 ntBASIC10.56□□□□□ -0.72
TNFRSF6BO95407 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 SPDYE14P-201ENST00000442619 822 ntBASIC10.56□□□□□ -0.72
TNFRSF6BO95407 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms