Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RCCD1A6NED2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RCCD1A6NED2 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCCD1A6NED2 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCCD1A6NED2 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCCD1A6NED2 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCCD1A6NED2 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCCD1A6NED2 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCCD1A6NED2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCCD1A6NED2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCCD1A6NED2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RCCD1A6NED2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCCD1A6NED2 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.39■□□□□ 0.05
RCCD1A6NED2 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RCCD1A6NED2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 HMGB1P8-201ENST00000558211 949 ntBASIC15.39■□□□□ 0.05
RCCD1A6NED2 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 AL358472.3-201ENST00000608147 415 ntBASIC15.39■□□□□ 0.05
RCCD1A6NED2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCCD1A6NED2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RCCD1A6NED2 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 PKD1P5-201ENST00000532415 10291 ntBASIC15.39■□□□□ 0.05
RCCD1A6NED2 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RCCD1A6NED2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 AL359845.1-201ENST00000458202 1648 ntBASIC15.39■□□□□ 0.05
RCCD1A6NED2 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.39■□□□□ 0.05
RCCD1A6NED2 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 TMBIM7P-202ENST00000641474 1516 ntBASIC15.38■□□□□ 0.05
RCCD1A6NED2 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 TPM3P8-201ENST00000330554 643 ntBASIC15.38■□□□□ 0.05
RCCD1A6NED2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 DGCR5-201ENST00000399539 862 ntBASIC15.38■□□□□ 0.05
RCCD1A6NED2 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 AC025279.2-201ENST00000569730 653 ntBASIC15.38■□□□□ 0.05
RCCD1A6NED2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 LINC02560-201ENST00000596379 459 ntBASIC15.38■□□□□ 0.05
RCCD1A6NED2 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.38■□□□□ 0.05
RCCD1A6NED2 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RCCD1A6NED2 PDIA3P1-201ENST00000471856 1510 ntBASIC15.38■□□□□ 0.05
RCCD1A6NED2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms