Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 ZNF423-204ENST00000562520 4018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 AL607033.1-201ENST00000623900 1599 ntBASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 GOLGA2P1-201ENST00000512938 2906 ntBASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 PCDHGB8P-202ENST00000507007 2873 ntBASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 MED24-203ENST00000394127 3456 ntTSL 2 BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 FER1L5-206ENST00000624922 6367 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 AC037459.3-201ENST00000521025 2750 ntBASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 CTBP1-AS2-202ENST00000505364 2423 ntTSL 2 BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 ACSBG2-202ENST00000586696 2739 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 UTP3-201ENST00000254803 2073 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LINC01558Q9Y6Z2 LINC02486-201ENST00000604157 3000 ntBASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 MXRA5Y-201ENST00000420610 8000 ntBASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 METTL16-201ENST00000263092 5711 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 PRRX1-207ENST00000497230 3501 ntTSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 KIR2DL4-205ENST00000396284 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 AC068896.1-201ENST00000494792 3422 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 C16orf82-202ENST00000505035 2459 ntAPPRIS P5 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 LINC01119-202ENST00000468141 2157 ntTSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 C3orf35-201ENST00000328376 1859 ntAPPRIS P5 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 PMPCAP1-201ENST00000508114 1576 ntBASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 AC034232.1-201ENST00000506026 1064 ntBASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 HNRNPUP1-201ENST00000554987 333 ntBASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 NME3-204ENST00000563498 920 ntTSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 AC110285.5-201ENST00000611501 352 ntBASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 MYC-209ENST00000641252 345 ntBASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 GABBR1-201ENST00000355973 3506 ntTSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 ABR-201ENST00000291107 2673 ntTSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 GIT2-204ENST00000361006 5444 ntTSL 5 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 DDI1-201ENST00000302259 2609 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
LINC01558Q9Y6Z2 CCDC36-204ENST00000452691 2315 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms