RNA–Protein interactions for RNA: ENST00000291107.6

ABR-201, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2 BASIC

Gene ABR, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-201ENST00000291107 NISCHQ9Y2I1 1504 aa25.3■■□□□ 1.64
ABR-201ENST00000291107 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
ABR-201ENST00000291107 ABCC9O60706 1549 aa22.58■■□□□ 1.21
ABR-201ENST00000291107 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
ABR-201ENST00000291107 NACADO15069 1562 aa21.86■■□□□ 1.09
ABR-201ENST00000291107 MYO15BQ96JP2 1530 aa21.79■■□□□ 1.08
ABR-201ENST00000291107 SHROOM4Q9ULL8 1493 aa21.53■■□□□ 1.04
ABR-201ENST00000291107 DCAF1Q9Y4B6 1507 aa21.33■■□□□ 1.01
ABR-201ENST00000291107 UNC13AQ9UPW8 1703 aa21.25■□□□□ 0.99
ABR-201ENST00000291107 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
ABR-201ENST00000291107 BICRAQ9NZM4 1560 aa21.16■□□□□ 0.98
ABR-201ENST00000291107 ZCCHC6Q5VYS8 1495 aaKnown RBP21■□□□□ 0.95
ABR-201ENST00000291107 SUPT5HO00267 1087 aaKnown RBP20.91■□□□□ 0.94
ABR-201ENST00000291107 DCAF8L2P0C7V8 631 aa20.89■□□□□ 0.93
ABR-201ENST00000291107 PABPN1Q86U42 306 aaKnown RBP eCLIP20.71■□□□□ 0.91
ABR-201ENST00000291107 CC2D2AQ9P2K1 1620 aa20.66■□□□□ 0.9
ABR-201ENST00000291107 EIF4G1Q04637 1599 aaKnown RBP20.65■□□□□ 0.9
ABR-201ENST00000291107 HRCP23327 699 aa20.6■□□□□ 0.89
ABR-201ENST00000291107 CECR2Q9BXF3 1484 aa20.59■□□□□ 0.89
ABR-201ENST00000291107 SCRIBQ14160 1630 aa20.46■□□□□ 0.87
ABR-201ENST00000291107 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
ABR-201ENST00000291107 PPARGC1BQ86YN6 1023 aaKnown RBP20.41■□□□□ 0.86
ABR-201ENST00000291107 CHIC1Q5VXU3 224 aa20.34■□□□□ 0.85
ABR-201ENST00000291107 CUX2O14529 1486 aa20.15■□□□□ 0.82
ABR-201ENST00000291107 NCAPD3P42695 1498 aa20.07■□□□□ 0.8
ABR-201ENST00000291107 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
ABR-201ENST00000291107 LOC105371045A0A1W2PR82 267 aa19.99■□□□□ 0.79
ABR-201ENST00000291107 DNAJC5Q9H3Z4 198 aa19.97■□□□□ 0.79
ABR-201ENST00000291107 SMARCA2P51531 1590 aa19.95■□□□□ 0.78
ABR-201ENST00000291107 PEG3Q9GZU2 1588 aa19.89■□□□□ 0.78
ABR-201ENST00000291107 ATAD2BQ9ULI0 1458 aa19.81■□□□□ 0.76
ABR-201ENST00000291107 SMARCA4P51532 1647 aa19.8■□□□□ 0.76
ABR-201ENST00000291107 BAZ1AQ9NRL2 1556 aaPredicted RBP19.76■□□□□ 0.75
ABR-201ENST00000291107 LAMC3Q9Y6N6 1575 aa19.71■□□□□ 0.75
ABR-201ENST00000291107 TRIM26Q12899 539 aaPredicted RBP19.67■□□□□ 0.74
ABR-201ENST00000291107 ERCC6Q03468 1493 aa19.66■□□□□ 0.74
ABR-201ENST00000291107 THOC2Q8NI27 1593 aaKnown RBP19.6■□□□□ 0.73
ABR-201ENST00000291107 RSF1Q96T23 1441 aaPredicted RBP19.58■□□□□ 0.73
ABR-201ENST00000291107 BAZ1BQ9UIG0 1483 aaKnown RBP19.57■□□□□ 0.72
ABR-201ENST00000291107 PDS5BQ9NTI5 1447 aa19.46■□□□□ 0.71
ABR-201ENST00000291107 SCAF1Q9H7N4 1312 aaKnown RBP19.46■□□□□ 0.71
ABR-201ENST00000291107 EHMT2Q96KQ7 1210 aa19.4■□□□□ 0.7
ABR-201ENST00000291107 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
ABR-201ENST00000291107 WDR62O43379 1518 aa19.36■□□□□ 0.69
ABR-201ENST00000291107 TRIM41Q8WV44 630 aa19.35■□□□□ 0.69
ABR-201ENST00000291107 MRC2Q9UBG0 1479 aa19.31■□□□□ 0.68
ABR-201ENST00000291107 PELP1Q8IZL8 1130 aaKnown RBP19.31■□□□□ 0.68
ABR-201ENST00000291107 NESP48681 1621 aa19.3■□□□□ 0.68
ABR-201ENST00000291107 ZEB1P37275 1124 aaPredicted RBP19.3■□□□□ 0.68
ABR-201ENST00000291107 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
ABR-201ENST00000291107 MROH2BQ7Z745 1585 aa19.29■□□□□ 0.68
ABR-201ENST00000291107 CADPSQ9ULU8 1353 aa19.28■□□□□ 0.68
ABR-201ENST00000291107 WIZO95785 1651 aa19.21■□□□□ 0.67
ABR-201ENST00000291107 PRDM2Q13029 1718 aa19.13■□□□□ 0.65
ABR-201ENST00000291107 CEP164Q9UPV0 1460 aa19.12■□□□□ 0.65
ABR-201ENST00000291107 CFTRP13569 1480 aa19.1■□□□□ 0.65
ABR-201ENST00000291107 TOP2AP11388 1531 aaKnown RBP19.06■□□□□ 0.64
ABR-201ENST00000291107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
ABR-201ENST00000291107 NEUROD1Q13562 356 aa19.01■□□□□ 0.63
ABR-201ENST00000291107 FANCD2Q9BXW9 1451 aa19■□□□□ 0.63
ABR-201ENST00000291107 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
ABR-201ENST00000291107 ABCC8Q09428 1581 aa18.95■□□□□ 0.62
ABR-201ENST00000291107 CCER1Q8TC90 406 aaPredicted RBP18.9■□□□□ 0.62
ABR-201ENST00000291107 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
ABR-201ENST00000291107 GTF3C3Q9Y5Q9 886 aa18.87■□□□□ 0.61
ABR-201ENST00000291107 IFT140Q96RY7 1462 aa18.87■□□□□ 0.61
ABR-201ENST00000291107 TTBK1Q5TCY1 1321 aaPredicted RBP18.87■□□□□ 0.61
ABR-201ENST00000291107 URB2Q14146 1524 aaKnown RBP18.84■□□□□ 0.61
ABR-201ENST00000291107 DIEXFQ68CQ4 756 aaKnown RBP18.79■□□□□ 0.6
ABR-201ENST00000291107 CCDC88BA6NC98 1476 aa18.79■□□□□ 0.6
ABR-201ENST00000291107 OSCARQ8IYS5 282 aa18.76■□□□□ 0.59
ABR-201ENST00000291107 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
ABR-201ENST00000291107 CENPBP07199 599 aaPredicted RBP18.68■□□□□ 0.58
ABR-201ENST00000291107 TOPBP1Q92547 1522 aa18.66■□□□□ 0.58
ABR-201ENST00000291107 RIMBP3CA6NJZ7 1639 aa18.65■□□□□ 0.58
ABR-201ENST00000291107 RIMBP3BA6NNM3 1639 aa18.65■□□□□ 0.58
ABR-201ENST00000291107 RIMBP3Q9UFD9 1639 aa18.65■□□□□ 0.58
ABR-201ENST00000291107 YTHDC1Q96MU7 727 aaKnown RBP18.63■□□□□ 0.57
ABR-201ENST00000291107 SOGA1O94964 1423 aa18.62■□□□□ 0.57
ABR-201ENST00000291107 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
ABR-201ENST00000291107 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
ABR-201ENST00000291107 RUSC2Q8N2Y8 1516 aa18.57■□□□□ 0.56
ABR-201ENST00000291107 ARHGEF11O15085 1522 aa18.56■□□□□ 0.56
ABR-201ENST00000291107 UBTFP17480 764 aaKnown RBP18.49■□□□□ 0.55
ABR-201ENST00000291107 CSRNP3Q8WYN3 585 aa18.46■□□□□ 0.54
ABR-201ENST00000291107 ZNF608Q9ULD9 1512 aaPredicted RBP18.45■□□□□ 0.54
ABR-201ENST00000291107 CHD1O14646 1710 aa18.45■□□□□ 0.54
ABR-201ENST00000291107 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
ABR-201ENST00000291107 MAGI1Q96QZ7 1491 aaPredicted RBP18.44■□□□□ 0.54
ABR-201ENST00000291107 ZNF316A6NFI3 1004 aaPredicted RBP18.44■□□□□ 0.54
ABR-201ENST00000291107 CEP162Q5TB80 1403 aa18.43■□□□□ 0.54
ABR-201ENST00000291107 POLA1P09884 1462 aaPredicted RBP18.4■□□□□ 0.54
ABR-201ENST00000291107 SYNJ1O43426 1573 aa18.39■□□□□ 0.54
ABR-201ENST00000291107 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.54
ABR-201ENST00000291107 MIER1Q8N108 512 aa18.39■□□□□ 0.54
ABR-201ENST00000291107 MYT1Q01538 1121 aa18.38■□□□□ 0.53
ABR-201ENST00000291107 RANGAP1P46060 587 aaPredicted RBP18.35■□□□□ 0.53
ABR-201ENST00000291107 ARAP1Q96P48 1450 aa18.33■□□□□ 0.53
ABR-201ENST00000291107 TNIKQ9UKE5 1360 aa18.32■□□□□ 0.52
ABR-201ENST00000291107 GRIN2BQ13224 1484 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms