Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL358472.5-202ENST00000641448 1267 ntBASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RHBDD3Q9Y3P4 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 C2orf27AP3-201ENST00000434123 579 ntBASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 AC233724.13-201ENST00000598383 410 ntBASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 AL354718.3-201ENST00000616414 581 ntBASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 AP001002.3-201ENST00000623482 206 ntBASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 CR382287.1-201ENST00000623954 586 ntBASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RHBDD3Q9Y3P4 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 AL122018.1-201ENST00000446607 2310 ntBASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 CU639417.3-201ENST00000624240 1404 ntBASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 AC009093.2-202ENST00000620513 2079 ntBASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.73□□□□□ -0.37
RHBDD3Q9Y3P4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms