Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TBC1D27-202ENST00000424239 1573 ntBASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 NEK4P3-201ENST00000604859 544 ntBASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 AC080013.5-201ENST00000607044 679 ntBASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRIM43Q96BQ3 AL162727.3-201ENST00000635661 2787 ntBASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 AC007952.5-201ENST00000572818 1486 ntBASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 SIRPB3P-201ENST00000340424 1216 ntBASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 RHOQP2-201ENST00000449922 579 ntBASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 ALG1L7P-201ENST00000502317 768 ntBASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 GPX3-202ENST00000517973 612 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 MT3-202ENST00000561640 514 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 AC079414.2-201ENST00000567157 1104 ntBASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 AL591424.3-201ENST00000614278 872 ntBASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRIM43Q96BQ3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 OR2W2P-201ENST00000406313 909 ntBASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 RN7SL351P-201ENST00000469306 248 ntBASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 AC004801.1-201ENST00000549557 360 ntBASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 AL359219.1-201ENST00000556311 934 ntBASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms