Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.52□□□□□ -0.25
CD47Q08722 AL442647.2-201ENST00000429864 857 ntBASIC13.52□□□□□ -0.25
CD47Q08722 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CD47Q08722 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.52□□□□□ -0.25
CD47Q08722 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.52□□□□□ -0.25
CD47Q08722 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.52□□□□□ -0.25
CD47Q08722 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.52□□□□□ -0.25
CD47Q08722 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.52□□□□□ -0.25
CD47Q08722 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.52□□□□□ -0.25
CD47Q08722 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.52□□□□□ -0.25
CD47Q08722 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 AL391825.1-201ENST00000457671 1364 ntBASIC13.52□□□□□ -0.25
CD47Q08722 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CD47Q08722 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CD47Q08722 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.52□□□□□ -0.25
CD47Q08722 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.52□□□□□ -0.25
CD47Q08722 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CD47Q08722 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 AGAP12P-201ENST00000585227 2359 ntBASIC13.51□□□□□ -0.25
CD47Q08722 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.51□□□□□ -0.25
CD47Q08722 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CD47Q08722 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.51□□□□□ -0.25
CD47Q08722 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CD47Q08722 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CD47Q08722 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.51□□□□□ -0.25
CD47Q08722 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CD47Q08722 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
CD47Q08722 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 FAM207CP-201ENST00000443486 507 ntBASIC13.51□□□□□ -0.25
CD47Q08722 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.51□□□□□ -0.25
CD47Q08722 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.51□□□□□ -0.25
CD47Q08722 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.51□□□□□ -0.25
CD47Q08722 AC133539.2-201ENST00000604757 467 ntBASIC13.51□□□□□ -0.25
CD47Q08722 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.51□□□□□ -0.25
CD47Q08722 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.51□□□□□ -0.25
CD47Q08722 AC008761.3-201ENST00000624803 892 ntBASIC13.51□□□□□ -0.25
CD47Q08722 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.51□□□□□ -0.25
CD47Q08722 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.51□□□□□ -0.25
CD47Q08722 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.51□□□□□ -0.25
CD47Q08722 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
CD47Q08722 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD47Q08722 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.51□□□□□ -0.25
CD47Q08722 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 MEX3B-202ENST00000558133 4333 ntBASIC13.5□□□□□ -0.25
CD47Q08722 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.5□□□□□ -0.25
CD47Q08722 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.5□□□□□ -0.25
CD47Q08722 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CD47Q08722 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
CD47Q08722 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CD47Q08722 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD47Q08722 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms