Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
VBP1P61758 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.01□□□□□ -0.33
VBP1P61758 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VBP1P61758 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC13□□□□□ -0.33
VBP1P61758 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
VBP1P61758 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
VBP1P61758 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13□□□□□ -0.33
VBP1P61758 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13□□□□□ -0.33
VBP1P61758 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13□□□□□ -0.33
VBP1P61758 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
VBP1P61758 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13□□□□□ -0.33
VBP1P61758 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13□□□□□ -0.33
VBP1P61758 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
VBP1P61758 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
VBP1P61758 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
VBP1P61758 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13□□□□□ -0.33
VBP1P61758 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13□□□□□ -0.33
VBP1P61758 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13□□□□□ -0.33
VBP1P61758 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 YBX2P1-201ENST00000394192 760 ntBASIC13□□□□□ -0.33
VBP1P61758 MTND6P24-201ENST00000440466 518 ntBASIC13□□□□□ -0.33
VBP1P61758 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13□□□□□ -0.33
VBP1P61758 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13□□□□□ -0.33
VBP1P61758 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13□□□□□ -0.33
VBP1P61758 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13□□□□□ -0.33
VBP1P61758 AC018529.1-201ENST00000613063 361 ntBASIC13□□□□□ -0.33
VBP1P61758 AL773604.1-201ENST00000617417 272 ntBASIC13□□□□□ -0.33
VBP1P61758 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13□□□□□ -0.33
VBP1P61758 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13□□□□□ -0.33
VBP1P61758 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13□□□□□ -0.33
VBP1P61758 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
VBP1P61758 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13□□□□□ -0.33
VBP1P61758 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
VBP1P61758 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13□□□□□ -0.33
VBP1P61758 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VBP1P61758 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.99□□□□□ -0.33
VBP1P61758 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
VBP1P61758 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
VBP1P61758 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
VBP1P61758 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.99□□□□□ -0.33
VBP1P61758 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.99□□□□□ -0.33
VBP1P61758 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
VBP1P61758 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.99□□□□□ -0.33
VBP1P61758 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.99□□□□□ -0.33
VBP1P61758 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
VBP1P61758 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
VBP1P61758 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.99□□□□□ -0.33
VBP1P61758 AC003101.2-201ENST00000612557 442 ntBASIC12.99□□□□□ -0.33
VBP1P61758 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
VBP1P61758 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms