Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
POLR3DP05423 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.31■□□□□ 0.36
POLR3DP05423 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
POLR3DP05423 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
POLR3DP05423 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.3■□□□□ 0.36
POLR3DP05423 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.3■□□□□ 0.36
POLR3DP05423 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.3■□□□□ 0.36
POLR3DP05423 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR3DP05423 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
POLR3DP05423 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR3DP05423 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.3■□□□□ 0.36
POLR3DP05423 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
POLR3DP05423 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR3DP05423 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR3DP05423 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.3■□□□□ 0.36
POLR3DP05423 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.3■□□□□ 0.36
POLR3DP05423 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.3■□□□□ 0.36
POLR3DP05423 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.3■□□□□ 0.36
POLR3DP05423 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR3DP05423 RTN3P1-201ENST00000536295 711 ntBASIC17.3■□□□□ 0.36
POLR3DP05423 PGAM1P5-201ENST00000548011 764 ntBASIC17.3■□□□□ 0.36
POLR3DP05423 AC003686.1-201ENST00000550956 1034 ntBASIC17.3■□□□□ 0.36
POLR3DP05423 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
POLR3DP05423 AC027237.1-201ENST00000560942 655 ntBASIC17.3■□□□□ 0.36
POLR3DP05423 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.3■□□□□ 0.36
POLR3DP05423 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.3■□□□□ 0.36
POLR3DP05423 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.3■□□□□ 0.36
POLR3DP05423 AC012044.1-201ENST00000603431 297 ntBASIC17.3■□□□□ 0.36
POLR3DP05423 AC015967.2-201ENST00000624092 234 ntBASIC17.3■□□□□ 0.36
POLR3DP05423 AC006435.4-201ENST00000625037 234 ntBASIC17.3■□□□□ 0.36
POLR3DP05423 AL356737.1-201ENST00000634391 234 ntBASIC17.3■□□□□ 0.36
POLR3DP05423 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.3■□□□□ 0.36
POLR3DP05423 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.3■□□□□ 0.36
POLR3DP05423 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.3■□□□□ 0.36
POLR3DP05423 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
POLR3DP05423 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
POLR3DP05423 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
POLR3DP05423 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
POLR3DP05423 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
POLR3DP05423 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
POLR3DP05423 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
POLR3DP05423 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR3DP05423 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
POLR3DP05423 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.29■□□□□ 0.36
POLR3DP05423 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
POLR3DP05423 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR3DP05423 MIR3907-201ENST00000579424 151 ntBASIC17.29■□□□□ 0.36
POLR3DP05423 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
POLR3DP05423 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 AC016629.1-201ENST00000596579 586 ntBASIC17.29■□□□□ 0.36
POLR3DP05423 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR3DP05423 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
POLR3DP05423 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR3DP05423 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR3DP05423 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR3DP05423 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
POLR3DP05423 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
POLR3DP05423 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR3DP05423 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR3DP05423 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR3DP05423 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR3DP05423 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR3DP05423 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR3DP05423 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR3DP05423 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR3DP05423 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR3DP05423 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms