Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 USP17L6P-201ENST00000382470 1197 ntBASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 ALG3P1-201ENST00000508806 1114 ntBASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 KRT18P25-201ENST00000508931 1278 ntBASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 RNA5-8SN1-201ENST00000610460 153 ntBASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 RNA5-8SN5-202ENST00000612463 153 ntBASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 RNA5-8SN4-201ENST00000613359 153 ntBASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 AL390754.1-201ENST00000619088 582 ntBASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 RNA5-8SN5-201ENST00000619471 153 ntBASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 AC008761.3-201ENST00000624803 892 ntBASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 AC118758.2-201ENST00000614242 2813 ntBASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC10.14□□□□□ -0.79
UBE2D4Q9Y2X8 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 STK3-218ENST00000617590 2485 ntTSL 5 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 HAL-202ENST00000538703 2637 ntTSL 2 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 AC020910.5-201ENST00000623668 1865 ntBASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 AC019294.4-201ENST00000561777 2905 ntBASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 SPDYE19P-201ENST00000338590 713 ntBASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 PGGT1BP2-201ENST00000398621 1028 ntBASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 PUDPP3-201ENST00000445368 636 ntBASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 AC004890.2-204ENST00000481968 304 ntBASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 AC027237.1-201ENST00000560942 655 ntBASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 AL359711.2-201ENST00000563105 872 ntBASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 BAP1-211ENST00000615113 489 ntBASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
UBE2D4Q9Y2X8 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms