Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 AC117489.1-201ENST00000625169 3217 ntBASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 SBF1P1-201ENST00000444527 5631 ntBASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VAT1LQ9HCJ6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 AHCYP4-201ENST00000419201 1315 ntBASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 NUP210P1-202ENST00000504322 710 ntBASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 AC245884.6-201ENST00000515672 1067 ntBASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.77■□□□□ 0.28
VAT1LQ9HCJ6 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VAT1LQ9HCJ6 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
VAT1LQ9HCJ6 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VAT1LQ9HCJ6 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.77■□□□□ 0.27
VAT1LQ9HCJ6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
VAT1LQ9HCJ6 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VAT1LQ9HCJ6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
VAT1LQ9HCJ6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VAT1LQ9HCJ6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 AL161932.2-201ENST00000435436 679 ntBASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 AL596276.2-201ENST00000447525 331 ntBASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 AC073150.1-201ENST00000450406 1084 ntBASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 CHMP4BP1-201ENST00000556017 588 ntBASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 RN7SL574P-201ENST00000581512 297 ntBASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAT1LQ9HCJ6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms