Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 HIST2H2BB-201ENST00000449108 381 ntBASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 AP003171.2-201ENST00000528208 925 ntBASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 MIR4683-201ENST00000579659 81 ntBASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 AC005695.3-201ENST00000614522 232 ntBASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 AL096828.3-201ENST00000615354 462 ntBASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 AC027612.1-201ENST00000445234 2395 ntBASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 AC011840.2-201ENST00000563063 1520 ntBASIC12.27□□□□□ -0.45
PCGF1Q9BSM1 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 INE2-201ENST00000630399 1874 ntBASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 AL591846.1-201ENST00000451736 433 ntBASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 AC244093.1-201ENST00000610837 814 ntBASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 AP001002.3-201ENST00000623482 206 ntBASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 AC002472.3-201ENST00000640124 621 ntBASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PCGF1Q9BSM1 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms