Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 ACTBP7-201ENST00000418351 1124 ntBASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 AC005777.1-201ENST00000588332 187 ntBASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 AL136982.5-201ENST00000605222 294 ntBASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 AC023157.3-201ENST00000619086 2088 ntBASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 GOLGA8UP-201ENST00000527159 1755 ntBASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 DUT-208ENST00000559540 1441 ntTSL 2 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CRAMP1Q96RY5 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 AC011498.7-201ENST00000624986 2027 ntBASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 FAM21EP-201ENST00000417804 985 ntBASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.37■□□□□ 0.37
CRAMP1Q96RY5 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CRAMP1Q96RY5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CRAMP1Q96RY5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CRAMP1Q96RY5 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC17.36■□□□□ 0.37
CRAMP1Q96RY5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CRAMP1Q96RY5 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CRAMP1Q96RY5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CRAMP1Q96RY5 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.36■□□□□ 0.37
CRAMP1Q96RY5 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CRAMP1Q96RY5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CRAMP1Q96RY5 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CRAMP1Q96RY5 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms