Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH3Q96II8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH3Q96II8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH3Q96II8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH3Q96II8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH3Q96II8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH3Q96II8 MED15P3-201ENST00000413613 326 ntBASIC15.59■□□□□ 0.09
LRCH3Q96II8 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.59■□□□□ 0.09
LRCH3Q96II8 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 AC136604.1-202ENST00000425471 771 ntBASIC15.59■□□□□ 0.09
LRCH3Q96II8 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH3Q96II8 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 TPT1P6-201ENST00000458298 514 ntBASIC15.59■□□□□ 0.09
LRCH3Q96II8 MIR2278-201ENST00000516344 96 ntBASIC15.59■□□□□ 0.09
LRCH3Q96II8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 EEF1DP7-201ENST00000580496 513 ntBASIC15.59■□□□□ 0.09
LRCH3Q96II8 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH3Q96II8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH3Q96II8 REXO1L2P-201ENST00000425429 2069 ntBASIC15.59■□□□□ 0.09
LRCH3Q96II8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH3Q96II8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH3Q96II8 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH3Q96II8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.59■□□□□ 0.09
LRCH3Q96II8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH3Q96II8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRCH3Q96II8 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LRCH3Q96II8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
LRCH3Q96II8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.58■□□□□ 0.09
LRCH3Q96II8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRCH3Q96II8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRCH3Q96II8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRCH3Q96II8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRCH3Q96II8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRCH3Q96II8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRCH3Q96II8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LRCH3Q96II8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.58■□□□□ 0.09
LRCH3Q96II8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 AL080243.1-201ENST00000423293 1060 ntBASIC15.58■□□□□ 0.08
LRCH3Q96II8 GOLGA6L16P-201ENST00000441780 1299 ntBASIC15.58■□□□□ 0.08
LRCH3Q96II8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 AL035414.1-201ENST00000451327 857 ntBASIC15.58■□□□□ 0.08
LRCH3Q96II8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 AC026412.1-206ENST00000502273 206 ntBASIC15.58■□□□□ 0.08
LRCH3Q96II8 ALG3P1-201ENST00000508806 1114 ntBASIC15.58■□□□□ 0.08
LRCH3Q96II8 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 FOXN3-AS2-201ENST00000554071 1262 ntBASIC15.58■□□□□ 0.08
LRCH3Q96II8 KRT8P1-201ENST00000557533 1207 ntBASIC15.58■□□□□ 0.08
LRCH3Q96II8 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 AP006248.1-201ENST00000610471 67 ntBASIC15.58■□□□□ 0.08
LRCH3Q96II8 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
LRCH3Q96II8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 AC006486.2-201ENST00000624246 2199 ntBASIC15.58■□□□□ 0.08
LRCH3Q96II8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRCH3Q96II8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms