Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RFX6Q8HWS3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.12■□□□□ 0.01
RFX6Q8HWS3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 AC008825.2-201ENST00000603374 718 ntBASIC15.12■□□□□ 0.01
RFX6Q8HWS3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 AC090643.2-201ENST00000623442 2029 ntBASIC15.12■□□□□ 0.01
RFX6Q8HWS3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 TUBB8P4-201ENST00000511806 1324 ntBASIC15.12■□□□□ 0.01
RFX6Q8HWS3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX6Q8HWS3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 MIR326-201ENST00000362220 95 ntBASIC15.11■□□□□ 0.01
RFX6Q8HWS3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 AL161932.2-201ENST00000435436 679 ntBASIC15.11■□□□□ 0.01
RFX6Q8HWS3 AL355994.2-201ENST00000447882 704 ntBASIC15.11■□□□□ 0.01
RFX6Q8HWS3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 AC105233.6-201ENST00000642093 218 ntBASIC15.11■□□□□ 0.01
RFX6Q8HWS3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 SHC1P1-201ENST00000425230 1745 ntBASIC15.11■□□□□ 0.01
RFX6Q8HWS3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 PDIA3P1-201ENST00000471856 1510 ntBASIC15.11■□□□□ 0.01
RFX6Q8HWS3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RFX6Q8HWS3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms