Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
TTC41PQ6P2S7 LINC01815-202ENST00000641468 1409 ntBASIC17.5■□□□□ 0.39
TTC41PQ6P2S7 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 HMGA1P1-201ENST00000415560 1062 ntBASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 AC244107.1-201ENST00000442033 332 ntBASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 AC243960.2-201ENST00000600996 747 ntBASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 KRT8P21-201ENST00000430398 1491 ntBASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 AL161772.1-201ENST00000610494 4412 ntBASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TTC41PQ6P2S7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 AC093752.3-201ENST00000567343 901 ntBASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TTC41PQ6P2S7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TTC41PQ6P2S7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC41PQ6P2S7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC41PQ6P2S7 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.47■□□□□ 0.39
TTC41PQ6P2S7 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms