Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP1Q00587 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 HMGA1P1-201ENST00000415560 1062 ntBASIC15.66■□□□□ 0.1
CDC42EP1Q00587 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.66■□□□□ 0.1
CDC42EP1Q00587 RPSAP31-201ENST00000416648 895 ntBASIC15.66■□□□□ 0.1
CDC42EP1Q00587 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP1Q00587 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 AC144831.1-201ENST00000573312 2656 ntBASIC15.65■□□□□ 0.1
CDC42EP1Q00587 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 NPM1P43-201ENST00000558669 786 ntBASIC15.65■□□□□ 0.1
CDC42EP1Q00587 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP1Q00587 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms