Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.88□□□□□ -0.35
SLC25A1P53007 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.88□□□□□ -0.35
SLC25A1P53007 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SLC25A1P53007 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SLC25A1P53007 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SLC25A1P53007 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.88□□□□□ -0.35
SLC25A1P53007 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 REXO1L6P-201ENST00000603433 1515 ntBASIC12.88□□□□□ -0.35
SLC25A1P53007 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.88□□□□□ -0.35
SLC25A1P53007 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.88□□□□□ -0.35
SLC25A1P53007 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SLC25A1P53007 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 PPT1-213ENST00000641319 2388 ntBASIC12.87□□□□□ -0.35
SLC25A1P53007 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.87□□□□□ -0.35
SLC25A1P53007 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SLC25A1P53007 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.87□□□□□ -0.35
SLC25A1P53007 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 MIR326-201ENST00000362220 95 ntBASIC12.87□□□□□ -0.35
SLC25A1P53007 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SLC25A1P53007 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.87□□□□□ -0.35
SLC25A1P53007 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SLC25A1P53007 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 AC112492.5-201ENST00000421897 457 ntBASIC12.87□□□□□ -0.35
SLC25A1P53007 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
SLC25A1P53007 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
SLC25A1P53007 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.87□□□□□ -0.35
SLC25A1P53007 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.87□□□□□ -0.35
SLC25A1P53007 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.87□□□□□ -0.35
SLC25A1P53007 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.87□□□□□ -0.35
SLC25A1P53007 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.87□□□□□ -0.35
SLC25A1P53007 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.87□□□□□ -0.35
SLC25A1P53007 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SLC25A1P53007 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 MARK2P9-201ENST00000430958 1727 ntBASIC12.87□□□□□ -0.35
SLC25A1P53007 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SLC25A1P53007 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 TMBIM7P-202ENST00000641474 1516 ntBASIC12.87□□□□□ -0.35
SLC25A1P53007 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SLC25A1P53007 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
SLC25A1P53007 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.87□□□□□ -0.35
SLC25A1P53007 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.87□□□□□ -0.35
SLC25A1P53007 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SLC25A1P53007 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC25A1P53007 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC25A1P53007 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC25A1P53007 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SLC25A1P53007 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC25A1P53007 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC25A1P53007 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC25A1P53007 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.86□□□□□ -0.35
SLC25A1P53007 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC25A1P53007 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC25A1P53007 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SLC25A1P53007 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SLC25A1P53007 LAP3P2-201ENST00000454686 1454 ntBASIC12.86□□□□□ -0.35
SLC25A1P53007 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC25A1P53007 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC25A1P53007 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SLC25A1P53007 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SLC25A1P53007 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.86□□□□□ -0.35
SLC25A1P53007 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.86□□□□□ -0.35
SLC25A1P53007 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.86□□□□□ -0.35
SLC25A1P53007 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.86□□□□□ -0.35
SLC25A1P53007 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SLC25A1P53007 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms