Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 AL583810.1-201ENST00000553344 1045 ntBASIC14.65□□□□□ -0.06
HLA-DPA1P20036 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.65□□□□□ -0.06
HLA-DPA1P20036 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.07
HLA-DPA1P20036 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 PTENP1-202ENST00000532280 3996 ntBASIC14.64□□□□□ -0.07
HLA-DPA1P20036 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 PEG13-201ENST00000631594 5667 ntBASIC14.64□□□□□ -0.07
HLA-DPA1P20036 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 MIR663B-201ENST00000408361 115 ntBASIC14.64□□□□□ -0.07
HLA-DPA1P20036 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 ST13P19-201ENST00000442505 1124 ntBASIC14.64□□□□□ -0.07
HLA-DPA1P20036 RPL13AP20-201ENST00000459725 609 ntBASIC14.64□□□□□ -0.07
HLA-DPA1P20036 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 AL023803.2-201ENST00000620080 638 ntBASIC14.64□□□□□ -0.07
HLA-DPA1P20036 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 TUBB1P2-201ENST00000422712 1306 ntBASIC14.64□□□□□ -0.07
HLA-DPA1P20036 TUBB1P1-201ENST00000503144 1300 ntBASIC14.64□□□□□ -0.07
HLA-DPA1P20036 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.64□□□□□ -0.07
HLA-DPA1P20036 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 KRT8P29-201ENST00000420409 1371 ntBASIC14.63□□□□□ -0.07
HLA-DPA1P20036 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.63□□□□□ -0.07
HLA-DPA1P20036 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPA1P20036 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms