Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC011447.5-201ENST00000616168 564 ntBASIC13.02□□□□□ -0.33
HLA-DOBP13765 AC244157.2-201ENST00000616239 1006 ntBASIC13.02□□□□□ -0.33
HLA-DOBP13765 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 AC010327.5-201ENST00000586923 3061 ntBASIC13.02□□□□□ -0.33
HLA-DOBP13765 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 AC079178.1-201ENST00000420915 656 ntBASIC13.01□□□□□ -0.33
HLA-DOBP13765 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 EEF1DP1-201ENST00000585891 896 ntBASIC13.01□□□□□ -0.33
HLA-DOBP13765 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 MIR6805-201ENST00000615055 62 ntBASIC13.01□□□□□ -0.33
HLA-DOBP13765 AL008718.2-201ENST00000609206 1313 ntBASIC13.01□□□□□ -0.33
HLA-DOBP13765 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 AL022313.4-201ENST00000562756 2046 ntBASIC13.01□□□□□ -0.33
HLA-DOBP13765 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DOBP13765 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DOBP13765 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13□□□□□ -0.33
HLA-DOBP13765 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 TCAM1P-207ENST00000485295 1537 ntBASIC13□□□□□ -0.33
HLA-DOBP13765 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DOBP13765 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13□□□□□ -0.33
HLA-DOBP13765 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13□□□□□ -0.33
HLA-DOBP13765 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms