Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 MIR4469-201ENST00000583919 79 ntBASIC10.9□□□□□ -0.66
SMIM17P0DL12 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 AC000095.1-201ENST00000603208 874 ntBASIC10.9□□□□□ -0.66
SMIM17P0DL12 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 GPER1-207ENST00000619052 571 ntTSL 2 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 AP001059.3-201ENST00000619053 235 ntBASIC10.9□□□□□ -0.66
SMIM17P0DL12 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 RAB34-224ENST00000636513 888 ntTSL 5 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 AL109936.8-201ENST00000641772 604 ntBASIC10.9□□□□□ -0.66
SMIM17P0DL12 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 AL109976.1-201ENST00000621919 5678 ntBASIC10.9□□□□□ -0.66
SMIM17P0DL12 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC10.9□□□□□ -0.66
SMIM17P0DL12 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SMIM17P0DL12 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
SMIM17P0DL12 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.9□□□□□ -0.67
SMIM17P0DL12 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SMIM17P0DL12 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC10.9□□□□□ -0.67
SMIM17P0DL12 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
SMIM17P0DL12 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC10.9□□□□□ -0.67
SMIM17P0DL12 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SMIM17P0DL12 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SMIM17P0DL12 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 AL137783.1-201ENST00000623494 1896 ntBASIC10.89□□□□□ -0.67
SMIM17P0DL12 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 AL645937.2-201ENST00000396808 931 ntBASIC10.89□□□□□ -0.67
SMIM17P0DL12 AC004945.1-201ENST00000416738 983 ntBASIC10.89□□□□□ -0.67
SMIM17P0DL12 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 HLA-V-204ENST00000476601 1289 ntBASIC10.89□□□□□ -0.67
SMIM17P0DL12 TMEM198B-204ENST00000484016 896 ntBASIC10.89□□□□□ -0.67
SMIM17P0DL12 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 POLD2P1-201ENST00000511220 997 ntBASIC10.89□□□□□ -0.67
SMIM17P0DL12 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 AC051619.7-201ENST00000568314 623 ntBASIC10.89□□□□□ -0.67
SMIM17P0DL12 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC10.89□□□□□ -0.67
SMIM17P0DL12 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SMIM17P0DL12 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM17P0DL12 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC10.88□□□□□ -0.67
SMIM17P0DL12 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM17P0DL12 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM17P0DL12 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SMIM17P0DL12 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms