RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 DCAF8L2P0C7V8 631 aa22.01■■□□□ 1.11
TUBGCP4-208ENST00000564079 EHMT2Q96KQ7 1210 aa20.02■□□□□ 0.8
TUBGCP4-208ENST00000564079 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
TUBGCP4-208ENST00000564079 SHROOM4Q9ULL8 1493 aa19.76■□□□□ 0.75
TUBGCP4-208ENST00000564079 FAM9AQ8IZU1 332 aaPredicted RBP19.47■□□□□ 0.71
TUBGCP4-208ENST00000564079 APLP2Q06481 763 aa19.3■□□□□ 0.68
TUBGCP4-208ENST00000564079 RANGAP1P46060 587 aaPredicted RBP19.25■□□□□ 0.67
TUBGCP4-208ENST00000564079 NISCHQ9Y2I1 1504 aa19.21■□□□□ 0.67
TUBGCP4-208ENST00000564079 TTBK1Q5TCY1 1321 aaPredicted RBP19.19■□□□□ 0.66
TUBGCP4-208ENST00000564079 ATP1B4Q9UN42 357 aaPredicted RBP19.15■□□□□ 0.66
TUBGCP4-208ENST00000564079 MYT1LQ9UL68 1186 aa18.79■□□□□ 0.6
TUBGCP4-208ENST00000564079 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
TUBGCP4-208ENST00000564079 PELP1Q8IZL8 1130 aaKnown RBP18.52■□□□□ 0.56
TUBGCP4-208ENST00000564079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.56
TUBGCP4-208ENST00000564079 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
TUBGCP4-208ENST00000564079 UBTFP17480 764 aaKnown RBP18.49■□□□□ 0.55
TUBGCP4-208ENST00000564079 PCGF6Q9BYE7 350 aa18.4■□□□□ 0.54
TUBGCP4-208ENST00000564079 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
TUBGCP4-208ENST00000564079 POLR3GLQ9BT43 218 aa18.16■□□□□ 0.5
TUBGCP4-208ENST00000564079 SLC4A1APQ9BWU0 796 aaKnown RBP18.11■□□□□ 0.49
TUBGCP4-208ENST00000564079 CCER1Q8TC90 406 aaPredicted RBP18.11■□□□□ 0.49
TUBGCP4-208ENST00000564079 ITGAEP38570 1179 aa18.09■□□□□ 0.49
TUBGCP4-208ENST00000564079 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
TUBGCP4-208ENST00000564079 CNGB1Q14028 1251 aaPredicted RBP18.03■□□□□ 0.48
TUBGCP4-208ENST00000564079 ERICH6Q7L0X2 663 aa18.01■□□□□ 0.47
TUBGCP4-208ENST00000564079 PABPN1Q86U42 306 aaKnown RBP eCLIP17.95■□□□□ 0.46
TUBGCP4-208ENST00000564079 FBLN2P98095 1184 aa17.94■□□□□ 0.46
TUBGCP4-208ENST00000564079 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
TUBGCP4-208ENST00000564079 YTHDC1Q96MU7 727 aaKnown RBP17.78■□□□□ 0.44
TUBGCP4-208ENST00000564079 ABCC9O60706 1549 aa17.77■□□□□ 0.44
TUBGCP4-208ENST00000564079 BCANQ96GW7 911 aa17.75■□□□□ 0.43
TUBGCP4-208ENST00000564079 NEFLP07196 543 aa17.72■□□□□ 0.43
TUBGCP4-208ENST00000564079 SLC24A1O60721 1099 aa17.63■□□□□ 0.41
TUBGCP4-208ENST00000564079 CENPBP07199 599 aaPredicted RBP17.62■□□□□ 0.41
TUBGCP4-208ENST00000564079 ARID3CA6NKF2 412 aa17.53■□□□□ 0.4
TUBGCP4-208ENST00000564079 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.39
TUBGCP4-208ENST00000564079 TRIM52Q96A61 297 aa17.51■□□□□ 0.39
TUBGCP4-208ENST00000564079 ZEB1P37275 1124 aaPredicted RBP17.49■□□□□ 0.39
TUBGCP4-208ENST00000564079 DAXXQ9UER7 740 aaPredicted RBP17.46■□□□□ 0.39
TUBGCP4-208ENST00000564079 ESF1Q9H501 851 aaKnown RBP17.45■□□□□ 0.38
TUBGCP4-208ENST00000564079 ZNF326Q5BKZ1 582 aaKnown RBP17.41■□□□□ 0.38
TUBGCP4-208ENST00000564079 BCL11AQ9H165 835 aa17.38■□□□□ 0.37
TUBGCP4-208ENST00000564079 CLSPNQ9HAW4 1339 aa17.29■□□□□ 0.36
TUBGCP4-208ENST00000564079 P3H3Q8IVL6 736 aa17.27■□□□□ 0.35
TUBGCP4-208ENST00000564079 ZNF777Q9ULD5 760 aaPredicted RBP17.26■□□□□ 0.35
TUBGCP4-208ENST00000564079 STAG3Q9UJ98 1225 aa17.26■□□□□ 0.35
TUBGCP4-208ENST00000564079 LOC105371045A0A1W2PR82 267 aa17.25■□□□□ 0.35
TUBGCP4-208ENST00000564079 NPM1P06748 294 aaKnown RBP eCLIP17.25■□□□□ 0.35
TUBGCP4-208ENST00000564079 NEUROD1Q13562 356 aa17.24■□□□□ 0.35
TUBGCP4-208ENST00000564079 SCAF1Q9H7N4 1312 aaKnown RBP17.2■□□□□ 0.34
TUBGCP4-208ENST00000564079 CHGAP10645 457 aaKnown RBP17.19■□□□□ 0.34
TUBGCP4-208ENST00000564079 A0A0G2JS52 829 aa17.17■□□□□ 0.34
TUBGCP4-208ENST00000564079 MYT1Q01538 1121 aa17.15■□□□□ 0.34
TUBGCP4-208ENST00000564079 ZBTB47Q9UFB7 747 aaPredicted RBP17.12■□□□□ 0.33
TUBGCP4-208ENST00000564079 PLEKHG5O94827 1062 aa17.12■□□□□ 0.33
TUBGCP4-208ENST00000564079 NEFMP07197 916 aa17.07■□□□□ 0.32
TUBGCP4-208ENST00000564079 TRIM26Q12899 539 aaPredicted RBP17.07■□□□□ 0.32
TUBGCP4-208ENST00000564079 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
TUBGCP4-208ENST00000564079 ZNF316A6NFI3 1004 aaPredicted RBP17.01■□□□□ 0.31
TUBGCP4-208ENST00000564079 CANXP27824 592 aaKnown RBP16.96■□□□□ 0.31
TUBGCP4-208ENST00000564079 ZBTB7CA1YPR0 619 aa16.94■□□□□ 0.3
TUBGCP4-208ENST00000564079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.29
TUBGCP4-208ENST00000564079 C14orf37Q86TY3 774 aa16.88■□□□□ 0.29
TUBGCP4-208ENST00000564079 CDK11AQ9UQ88 783 aaPredicted RBP16.88■□□□□ 0.29
TUBGCP4-208ENST00000564079 ARID4BQ4LE39 1312 aaPredicted RBP16.88■□□□□ 0.29
TUBGCP4-208ENST00000564079 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
TUBGCP4-208ENST00000564079 HAP1P54257 671 aaPredicted RBP16.8■□□□□ 0.28
TUBGCP4-208ENST00000564079 CHMP7Q8WUX9 453 aaPredicted RBP16.8■□□□□ 0.28
TUBGCP4-208ENST00000564079 KCNH8Q96L42 1107 aa16.75■□□□□ 0.27
TUBGCP4-208ENST00000564079 HRCP23327 699 aa16.73■□□□□ 0.27
TUBGCP4-208ENST00000564079 PPP1R15AO75807 674 aaPredicted RBP16.7■□□□□ 0.26
TUBGCP4-208ENST00000564079 NPM2Q86SE8 214 aaKnown RBP16.68■□□□□ 0.26
TUBGCP4-208ENST00000564079 ANP32CO43423 234 aa16.68■□□□□ 0.26
TUBGCP4-208ENST00000564079 SCRIBQ14160 1630 aa16.64■□□□□ 0.25
TUBGCP4-208ENST00000564079 CHIC2Q9UKJ5 165 aa16.63■□□□□ 0.25
TUBGCP4-208ENST00000564079 ARXQ96QS3 562 aa16.62■□□□□ 0.25
TUBGCP4-208ENST00000564079 RTL5Q5HYW3 569 aaPredicted RBP16.59■□□□□ 0.25
TUBGCP4-208ENST00000564079 LMOD2Q6P5Q4 547 aa16.56■□□□□ 0.24
TUBGCP4-208ENST00000564079 KDM2AQ9Y2K7 1162 aa16.55■□□□□ 0.24
TUBGCP4-208ENST00000564079 DIEXFQ68CQ4 756 aaKnown RBP16.54■□□□□ 0.24
TUBGCP4-208ENST00000564079 SALL2Q9Y467 1007 aaPredicted RBP16.52■□□□□ 0.23
TUBGCP4-208ENST00000564079 TSPY4P0CV99 314 aa16.51■□□□□ 0.23
TUBGCP4-208ENST00000564079 TSPY10P0CW01 314 aa16.51■□□□□ 0.23
TUBGCP4-208ENST00000564079 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
TUBGCP4-208ENST00000564079 ERCC6Q03468 1493 aa16.5■□□□□ 0.23
TUBGCP4-208ENST00000564079 NPHP1O15259 732 aa16.47■□□□□ 0.23
TUBGCP4-208ENST00000564079 MLECQ14165 292 aa16.45■□□□□ 0.22
TUBGCP4-208ENST00000564079 TMC1Q8TDI8 760 aa16.37■□□□□ 0.21
TUBGCP4-208ENST00000564079 TULP1O00294 542 aaPredicted RBP16.37■□□□□ 0.21
TUBGCP4-208ENST00000564079 HSP90AA1P07900 732 aaKnown RBP16.34■□□□□ 0.21
TUBGCP4-208ENST00000564079 TONSLQ96HA7 1378 aa16.34■□□□□ 0.21
TUBGCP4-208ENST00000564079 PPM1GO15355 546 aaPredicted RBP16.33■□□□□ 0.21
TUBGCP4-208ENST00000564079 AEBP2Q6ZN18 517 aaPredicted RBP16.33■□□□□ 0.2
TUBGCP4-208ENST00000564079 PLEKHD1A6NEE1 506 aa16.32■□□□□ 0.2
TUBGCP4-208ENST00000564079 RGL3Q3MIN7 710 aa16.3■□□□□ 0.2
TUBGCP4-208ENST00000564079 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
TUBGCP4-208ENST00000564079 MTUS2Q5JR59 1369 aa16.28■□□□□ 0.2
TUBGCP4-208ENST00000564079 FAM9BQ8IZU0 186 aa16.28■□□□□ 0.2
TUBGCP4-208ENST00000564079 RRP7BPQ9NSQ0 103 aa16.25■□□□□ 0.19
TUBGCP4-208ENST00000564079 CDK11BP21127 795 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms