Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CTSBP07858 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.64□□□□□ -0.23
CTSBP07858 FGFR3P1-201ENST00000449999 601 ntBASIC13.64□□□□□ -0.23
CTSBP07858 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.64□□□□□ -0.23
CTSBP07858 NDUFS6P1-201ENST00000485187 316 ntBASIC13.64□□□□□ -0.23
CTSBP07858 ALG1L13P-202ENST00000519320 584 ntBASIC13.64□□□□□ -0.23
CTSBP07858 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.64□□□□□ -0.23
CTSBP07858 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CTSBP07858 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.64□□□□□ -0.23
CTSBP07858 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.64□□□□□ -0.23
CTSBP07858 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CTSBP07858 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.64□□□□□ -0.23
CTSBP07858 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.64□□□□□ -0.23
CTSBP07858 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.64□□□□□ -0.23
CTSBP07858 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSBP07858 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSBP07858 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.64□□□□□ -0.23
CTSBP07858 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSBP07858 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CTSBP07858 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CTSBP07858 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CTSBP07858 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSBP07858 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.64□□□□□ -0.23
CTSBP07858 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CTSBP07858 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.64□□□□□ -0.23
CTSBP07858 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSBP07858 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CTSBP07858 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CTSBP07858 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.64□□□□□ -0.23
CTSBP07858 SNX18-202ENST00000343017 3140 ntBASIC13.64□□□□□ -0.23
CTSBP07858 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.64□□□□□ -0.23
CTSBP07858 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.63□□□□□ -0.23
CTSBP07858 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.63□□□□□ -0.23
CTSBP07858 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.63□□□□□ -0.23
CTSBP07858 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.63□□□□□ -0.23
CTSBP07858 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CTSBP07858 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.63□□□□□ -0.23
CTSBP07858 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.63□□□□□ -0.23
CTSBP07858 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.63□□□□□ -0.23
CTSBP07858 MIR557-201ENST00000385239 98 ntBASIC13.63□□□□□ -0.23
CTSBP07858 AL627231.1-201ENST00000394467 1125 ntBASIC13.63□□□□□ -0.23
CTSBP07858 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.63□□□□□ -0.23
CTSBP07858 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.63□□□□□ -0.23
CTSBP07858 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.63□□□□□ -0.23
CTSBP07858 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CTSBP07858 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.63□□□□□ -0.23
CTSBP07858 AC132872.1-201ENST00000566986 1195 ntBASIC13.63□□□□□ -0.23
CTSBP07858 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.63□□□□□ -0.23
CTSBP07858 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CTSBP07858 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.63□□□□□ -0.23
CTSBP07858 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.63□□□□□ -0.23
CTSBP07858 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.63□□□□□ -0.23
CTSBP07858 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.63□□□□□ -0.23
CTSBP07858 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.63□□□□□ -0.23
CTSBP07858 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.63□□□□□ -0.23
CTSBP07858 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CTSBP07858 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.63□□□□□ -0.23
CTSBP07858 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 LINC01815-202ENST00000641468 1409 ntBASIC13.63□□□□□ -0.23
CTSBP07858 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSBP07858 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.63□□□□□ -0.23
CTSBP07858 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSBP07858 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSBP07858 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSBP07858 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CTSBP07858 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSBP07858 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.62□□□□□ -0.23
CTSBP07858 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSBP07858 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CTSBP07858 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CTSBP07858 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSBP07858 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms