Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
NACAE9PAV3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC10.73□□□□□ -0.69
NACAE9PAV3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
NACAE9PAV3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC10.73□□□□□ -0.69
NACAE9PAV3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC10.73□□□□□ -0.69
NACAE9PAV3 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
NACAE9PAV3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC10.73□□□□□ -0.69
NACAE9PAV3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC10.73□□□□□ -0.69
NACAE9PAV3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC10.73□□□□□ -0.69
NACAE9PAV3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC10.73□□□□□ -0.69
NACAE9PAV3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC10.73□□□□□ -0.69
NACAE9PAV3 AC012441.1-201ENST00000446669 685 ntBASIC10.73□□□□□ -0.69
NACAE9PAV3 AL355864.2-201ENST00000447420 863 ntBASIC10.73□□□□□ -0.69
NACAE9PAV3 CROCCP4-201ENST00000457096 498 ntBASIC10.73□□□□□ -0.69
NACAE9PAV3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
NACAE9PAV3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC10.73□□□□□ -0.69
NACAE9PAV3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC10.73□□□□□ -0.69
NACAE9PAV3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC10.73□□□□□ -0.69
NACAE9PAV3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC10.73□□□□□ -0.69
NACAE9PAV3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC10.73□□□□□ -0.69
NACAE9PAV3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC10.73□□□□□ -0.69
NACAE9PAV3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC10.73□□□□□ -0.69
NACAE9PAV3 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
NACAE9PAV3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 AC136759.1-202ENST00000530858 2194 ntBASIC10.73□□□□□ -0.69
NACAE9PAV3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC10.73□□□□□ -0.69
NACAE9PAV3 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC10.73□□□□□ -0.69
NACAE9PAV3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 AL928921.2-201ENST00000641325 2442 ntBASIC10.73□□□□□ -0.69
NACAE9PAV3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
NACAE9PAV3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC10.73□□□□□ -0.69
NACAE9PAV3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
NACAE9PAV3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC10.72□□□□□ -0.69
NACAE9PAV3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC10.72□□□□□ -0.69
NACAE9PAV3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.72□□□□□ -0.69
NACAE9PAV3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC10.72□□□□□ -0.69
NACAE9PAV3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
NACAE9PAV3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC10.72□□□□□ -0.69
NACAE9PAV3 AL355994.2-201ENST00000447882 704 ntBASIC10.72□□□□□ -0.69
NACAE9PAV3 TDH-203ENST00000531764 1110 ntBASIC10.72□□□□□ -0.69
NACAE9PAV3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC10.72□□□□□ -0.69
NACAE9PAV3 AL512343.1-201ENST00000605837 169 ntBASIC10.72□□□□□ -0.69
NACAE9PAV3 AL022328.1-201ENST00000610050 478 ntBASIC10.72□□□□□ -0.69
NACAE9PAV3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
NACAE9PAV3 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 LRRC59-203ENST00000576448 1531 ntBASIC10.72□□□□□ -0.69
NACAE9PAV3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC10.72□□□□□ -0.69
NACAE9PAV3 KHSRPP1-201ENST00000427983 1768 ntBASIC10.72□□□□□ -0.69
NACAE9PAV3 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
NACAE9PAV3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
NACAE9PAV3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC10.72□□□□□ -0.69
NACAE9PAV3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
NACAE9PAV3 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC10.72□□□□□ -0.69
NACAE9PAV3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC10.72□□□□□ -0.69
NACAE9PAV3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC10.72□□□□□ -0.69
NACAE9PAV3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
NACAE9PAV3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC10.72□□□□□ -0.69
NACAE9PAV3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
NACAE9PAV3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC10.72□□□□□ -0.69
NACAE9PAV3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC10.72□□□□□ -0.69
NACAE9PAV3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
NACAE9PAV3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NACAE9PAV3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC10.72□□□□□ -0.69
NACAE9PAV3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC10.72□□□□□ -0.69
NACAE9PAV3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
NACAE9PAV3 AP003171.2-201ENST00000528208 925 ntBASIC10.72□□□□□ -0.69
NACAE9PAV3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms