Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.52□□□□□ -0.09
SPASTQ9UBP0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 KRT8P19-201ENST00000551916 1455 ntBASIC14.51□□□□□ -0.09
SPASTQ9UBP0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 ELK2AP-201ENST00000392510 1007 ntBASIC14.51□□□□□ -0.09
SPASTQ9UBP0 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 ACTG1P2-201ENST00000415776 1125 ntBASIC14.51□□□□□ -0.09
SPASTQ9UBP0 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 ACTG1P11-201ENST00000425411 1125 ntBASIC14.51□□□□□ -0.09
SPASTQ9UBP0 AC006335.1-201ENST00000445200 547 ntBASIC14.51□□□□□ -0.09
SPASTQ9UBP0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 AC012618.1-201ENST00000461223 412 ntBASIC14.51□□□□□ -0.09
SPASTQ9UBP0 HLA-J-204ENST00000495278 958 ntBASIC14.51□□□□□ -0.09
SPASTQ9UBP0 AC090857.1-201ENST00000527400 390 ntBASIC14.51□□□□□ -0.09
SPASTQ9UBP0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 RN7SL190P-201ENST00000582519 257 ntBASIC14.51□□□□□ -0.09
SPASTQ9UBP0 MIR6720-201ENST00000611664 98 ntBASIC14.51□□□□□ -0.09
SPASTQ9UBP0 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPASTQ9UBP0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 AL031595.1-201ENST00000623969 4709 ntBASIC14.5□□□□□ -0.09
SPASTQ9UBP0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.5□□□□□ -0.09
SPASTQ9UBP0 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 RCC2P8-201ENST00000502779 1035 ntBASIC14.5□□□□□ -0.09
SPASTQ9UBP0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 NUP210P1-202ENST00000504322 710 ntBASIC14.5□□□□□ -0.09
SPASTQ9UBP0 GCOM2-201ENST00000509133 1104 ntBASIC14.5□□□□□ -0.09
SPASTQ9UBP0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 AC131206.1-201ENST00000538078 1211 ntBASIC14.5□□□□□ -0.09
SPASTQ9UBP0 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 FGFR3P5-201ENST00000564496 886 ntBASIC14.5□□□□□ -0.09
SPASTQ9UBP0 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 AC016629.1-201ENST00000596579 586 ntBASIC14.5□□□□□ -0.09
SPASTQ9UBP0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SPASTQ9UBP0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms